RNA–Protein interactions for RNA: ENST00000494278.1

FAM50A-207, Transcript of family with sequence similarity 50 member A, humanhuman

TSL 2

Gene FAM50A, Length 294 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM50A-207ENST00000494278 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
FAM50A-207ENST00000494278 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.66
FAM50A-207ENST00000494278 ABCC9O60706 1549 aa24.81■■□□□ 1.56
FAM50A-207ENST00000494278 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
FAM50A-207ENST00000494278 NACADO15069 1562 aa23.87■■□□□ 1.41
FAM50A-207ENST00000494278 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
FAM50A-207ENST00000494278 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
FAM50A-207ENST00000494278 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
FAM50A-207ENST00000494278 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
FAM50A-207ENST00000494278 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
FAM50A-207ENST00000494278 BICRAQ9NZM4 1560 aa23.21■■□□□ 1.31
FAM50A-207ENST00000494278 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
FAM50A-207ENST00000494278 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.29
FAM50A-207ENST00000494278 SHROOM4Q9ULL8 1493 aa23.03■■□□□ 1.28
FAM50A-207ENST00000494278 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
FAM50A-207ENST00000494278 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
FAM50A-207ENST00000494278 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
FAM50A-207ENST00000494278 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.16
FAM50A-207ENST00000494278 SMARCA4P51532 1647 aa22.13■■□□□ 1.13
FAM50A-207ENST00000494278 BAZ1AQ9NRL2 1556 aaPredicted RBP22.09■■□□□ 1.13
FAM50A-207ENST00000494278 NCAPD3P42695 1498 aa22■■□□□ 1.11
FAM50A-207ENST00000494278 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
FAM50A-207ENST00000494278 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
FAM50A-207ENST00000494278 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
FAM50A-207ENST00000494278 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
FAM50A-207ENST00000494278 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
FAM50A-207ENST00000494278 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
FAM50A-207ENST00000494278 WIZO95785 1651 aa21.69■■□□□ 1.06
FAM50A-207ENST00000494278 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
FAM50A-207ENST00000494278 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
FAM50A-207ENST00000494278 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
FAM50A-207ENST00000494278 NESP48681 1621 aa21.46■■□□□ 1.03
FAM50A-207ENST00000494278 ERCC6Q03468 1493 aa21.39■■□□□ 1.01
FAM50A-207ENST00000494278 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
FAM50A-207ENST00000494278 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
FAM50A-207ENST00000494278 CUX2O14529 1486 aa21.28■■□□□ 1
FAM50A-207ENST00000494278 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
FAM50A-207ENST00000494278 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
FAM50A-207ENST00000494278 CFTRP13569 1480 aa21.21■□□□□ 0.99
FAM50A-207ENST00000494278 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
FAM50A-207ENST00000494278 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
FAM50A-207ENST00000494278 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
FAM50A-207ENST00000494278 MRC2Q9UBG0 1479 aa21.08■□□□□ 0.97
FAM50A-207ENST00000494278 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
FAM50A-207ENST00000494278 WDR62O43379 1518 aa21.06■□□□□ 0.96
FAM50A-207ENST00000494278 URB2Q14146 1524 aaKnown RBP20.9■□□□□ 0.94
FAM50A-207ENST00000494278 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
FAM50A-207ENST00000494278 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
FAM50A-207ENST00000494278 TOPBP1Q92547 1522 aa20.76■□□□□ 0.91
FAM50A-207ENST00000494278 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
FAM50A-207ENST00000494278 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
FAM50A-207ENST00000494278 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
FAM50A-207ENST00000494278 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
FAM50A-207ENST00000494278 CUX1P39880 1505 aa20.58■□□□□ 0.88
FAM50A-207ENST00000494278 POLA1P09884 1462 aaPredicted RBP20.57■□□□□ 0.88
FAM50A-207ENST00000494278 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
FAM50A-207ENST00000494278 EIF4G3O43432 1585 aaKnown RBP20.53■□□□□ 0.88
FAM50A-207ENST00000494278 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
FAM50A-207ENST00000494278 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
FAM50A-207ENST00000494278 BIVM-ERCC5R4GMW8 1640 aa20.44■□□□□ 0.86
FAM50A-207ENST00000494278 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
FAM50A-207ENST00000494278 SOGA1O94964 1423 aa20.43■□□□□ 0.86
FAM50A-207ENST00000494278 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
FAM50A-207ENST00000494278 SYNJ1O43426 1573 aa20.38■□□□□ 0.85
FAM50A-207ENST00000494278 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.854e-12■■■■□ 21.6
FAM50A-207ENST00000494278 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
FAM50A-207ENST00000494278 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
FAM50A-207ENST00000494278 TDRD9Q8NDG6 1382 aaKnown RBP20.3■□□□□ 0.84
FAM50A-207ENST00000494278 ABCA5Q8WWZ7 1642 aa20.3■□□□□ 0.84
FAM50A-207ENST00000494278 CHD1O14646 1710 aa20.29■□□□□ 0.84
FAM50A-207ENST00000494278 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
FAM50A-207ENST00000494278 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
FAM50A-207ENST00000494278 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
FAM50A-207ENST00000494278 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
FAM50A-207ENST00000494278 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
FAM50A-207ENST00000494278 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
FAM50A-207ENST00000494278 SYNJ2O15056 1496 aa20.14■□□□□ 0.81
FAM50A-207ENST00000494278 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
FAM50A-207ENST00000494278 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
FAM50A-207ENST00000494278 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
FAM50A-207ENST00000494278 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
FAM50A-207ENST00000494278 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
FAM50A-207ENST00000494278 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
FAM50A-207ENST00000494278 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
FAM50A-207ENST00000494278 FBLN2P98095 1184 aa20.03■□□□□ 0.8
FAM50A-207ENST00000494278 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
FAM50A-207ENST00000494278 GRIN2AQ12879 1464 aa20■□□□□ 0.79
FAM50A-207ENST00000494278 FHAD1B1AJZ9 1412 aa20■□□□□ 0.79
FAM50A-207ENST00000494278 KIF27Q86VH2 1401 aa19.94■□□□□ 0.78
FAM50A-207ENST00000494278 NUP160Q12769 1436 aa19.93■□□□□ 0.78
FAM50A-207ENST00000494278 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
FAM50A-207ENST00000494278 CUL7Q14999 1698 aa19.93■□□□□ 0.78
FAM50A-207ENST00000494278 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
FAM50A-207ENST00000494278 SHROOM2Q13796 1616 aa19.85■□□□□ 0.77
FAM50A-207ENST00000494278 IGF1RP08069 1367 aa19.84■□□□□ 0.77
FAM50A-207ENST00000494278 RUSC2Q8N2Y8 1516 aa19.82■□□□□ 0.76
FAM50A-207ENST00000494278 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
FAM50A-207ENST00000494278 ERCC6L2Q5T890 1561 aa19.73■□□□□ 0.75
FAM50A-207ENST00000494278 CARMIL1Q5VZK9 1371 aa19.72■□□□□ 0.75
FAM50A-207ENST00000494278 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms