RNA–Protein interactions for RNA: ENST00000471040.5

TRMT2A-212, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 3

Gene TRMT2A, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-212ENST00000471040 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
TRMT2A-212ENST00000471040 CCDC180Q9P1Z9 1646 aa38.18■■■■□ 3.7
TRMT2A-212ENST00000471040 ABCC9O60706 1549 aa37.76■■■■□ 3.63
TRMT2A-212ENST00000471040 RB1CC1Q8TDY2 1594 aa36.21■■■■□ 3.39
TRMT2A-212ENST00000471040 NACADO15069 1562 aa36.07■■■■□ 3.37
TRMT2A-212ENST00000471040 MYO15BQ96JP2 1530 aa35.79■■■■□ 3.32
TRMT2A-212ENST00000471040 DCAF8L2P0C7V8 631 aa35.64■■■■□ 3.3
TRMT2A-212ENST00000471040 DCAF1Q9Y4B6 1507 aa35.36■■■■□ 3.25
TRMT2A-212ENST00000471040 ZCCHC6Q5VYS8 1495 aaKnown RBP35.35■■■■□ 3.25
TRMT2A-212ENST00000471040 UNC13AQ9UPW8 1703 aa35.26■■■■□ 3.24
TRMT2A-212ENST00000471040 DNAJC5BQ9UF47 199 aa35.25■■■■□ 3.23
TRMT2A-212ENST00000471040 PABPN1Q86U42 306 aaKnown RBP eCLIP35.16■■■■□ 3.22
TRMT2A-212ENST00000471040 BICRAQ9NZM4 1560 aa35.08■■■■□ 3.21
TRMT2A-212ENST00000471040 SHROOM4Q9ULL8 1493 aa34.89■■■■□ 3.18
TRMT2A-212ENST00000471040 SCRIBQ14160 1630 aa34.57■■■■□ 3.12
TRMT2A-212ENST00000471040 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
TRMT2A-212ENST00000471040 CC2D2AQ9P2K1 1620 aa34.19■■■■□ 3.06
TRMT2A-212ENST00000471040 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
TRMT2A-212ENST00000471040 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
TRMT2A-212ENST00000471040 ATAD2BQ9ULI0 1458 aa33.15■■■□□ 2.9
TRMT2A-212ENST00000471040 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
TRMT2A-212ENST00000471040 SMARCA2P51531 1590 aa33.13■■■□□ 2.89
TRMT2A-212ENST00000471040 BAZ1AQ9NRL2 1556 aaPredicted RBP33.08■■■□□ 2.89
TRMT2A-212ENST00000471040 HMGXB3Q12766 1538 aa33.06■■■□□ 2.88
TRMT2A-212ENST00000471040 PEG3Q9GZU2 1588 aa32.95■■■□□ 2.86
TRMT2A-212ENST00000471040 BAZ1BQ9UIG0 1483 aaKnown RBP32.81■■■□□ 2.84
TRMT2A-212ENST00000471040 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
TRMT2A-212ENST00000471040 CUX2O14529 1486 aa32.67■■■□□ 2.82
TRMT2A-212ENST00000471040 ERCC6Q03468 1493 aa32.64■■■□□ 2.82
TRMT2A-212ENST00000471040 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
TRMT2A-212ENST00000471040 NESP48681 1621 aa32.48■■■□□ 2.79
TRMT2A-212ENST00000471040 DNAJC5Q9H3Z4 198 aa32.37■■■□□ 2.77
TRMT2A-212ENST00000471040 PDS5BQ9NTI5 1447 aa32.31■■■□□ 2.76
TRMT2A-212ENST00000471040 WIZO95785 1651 aa32.31■■■□□ 2.76
TRMT2A-212ENST00000471040 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
TRMT2A-212ENST00000471040 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.75
TRMT2A-212ENST00000471040 THOC2Q8NI27 1593 aaKnown RBP32.19■■■□□ 2.74
TRMT2A-212ENST00000471040 KIF21AQ7Z4S6 1674 aa32.08■■■□□ 2.73
TRMT2A-212ENST00000471040 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
TRMT2A-212ENST00000471040 CFTRP13569 1480 aa31.95■■■□□ 2.7
TRMT2A-212ENST00000471040 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
TRMT2A-212ENST00000471040 WDR62O43379 1518 aa31.87■■■□□ 2.69
TRMT2A-212ENST00000471040 CEP164Q9UPV0 1460 aa31.84■■■□□ 2.69
TRMT2A-212ENST00000471040 FANCD2Q9BXW9 1451 aa31.83■■■□□ 2.69
TRMT2A-212ENST00000471040 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
TRMT2A-212ENST00000471040 PRDM2Q13029 1718 aa31.59■■■□□ 2.65
TRMT2A-212ENST00000471040 URB2Q14146 1524 aaKnown RBP31.52■■■□□ 2.64
TRMT2A-212ENST00000471040 ABCC8Q09428 1581 aa31.37■■■□□ 2.61
TRMT2A-212ENST00000471040 IFT140Q96RY7 1462 aa31.26■■■□□ 2.59
TRMT2A-212ENST00000471040 TOPBP1Q92547 1522 aa31.25■■■□□ 2.59
TRMT2A-212ENST00000471040 OSCARQ8IYS5 282 aa31.18■■■□□ 2.58
TRMT2A-212ENST00000471040 DNMBPQ6XZF7 1577 aa31.17■■■□□ 2.58
TRMT2A-212ENST00000471040 ZNF608Q9ULD9 1512 aaPredicted RBP31.05■■■□□ 2.56
TRMT2A-212ENST00000471040 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.55
TRMT2A-212ENST00000471040 POLA1P09884 1462 aaPredicted RBP30.94■■■□□ 2.54
TRMT2A-212ENST00000471040 EIF4G3O43432 1585 aaKnown RBP30.91■■■□□ 2.54
TRMT2A-212ENST00000471040 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
TRMT2A-212ENST00000471040 SOGA1O94964 1423 aa30.82■■■□□ 2.52
TRMT2A-212ENST00000471040 AQRO60306 1485 aaKnown RBP eCLIP30.81■■■□□ 2.523e-7■■■■□ 22.4
TRMT2A-212ENST00000471040 TRIM41Q8WV44 630 aa30.79■■■□□ 2.52
TRMT2A-212ENST00000471040 CUX1P39880 1505 aa30.75■■■□□ 2.51
TRMT2A-212ENST00000471040 SUPT5HO00267 1087 aaKnown RBP30.75■■■□□ 2.51
TRMT2A-212ENST00000471040 FGD5Q6ZNL6 1462 aa30.74■■■□□ 2.51
TRMT2A-212ENST00000471040 RAD54L2Q9Y4B4 1467 aa30.74■■■□□ 2.51
TRMT2A-212ENST00000471040 TDRD9Q8NDG6 1382 aaKnown RBP30.66■■■□□ 2.5
TRMT2A-212ENST00000471040 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
TRMT2A-212ENST00000471040 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
TRMT2A-212ENST00000471040 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
TRMT2A-212ENST00000471040 CHD1O14646 1710 aa30.6■■■□□ 2.49
TRMT2A-212ENST00000471040 ARHGEF11O15085 1522 aa30.58■■■□□ 2.49
TRMT2A-212ENST00000471040 MAGI1Q96QZ7 1491 aaPredicted RBP30.57■■■□□ 2.48
TRMT2A-212ENST00000471040 GRIN2BQ13224 1484 aa30.56■■■□□ 2.48
TRMT2A-212ENST00000471040 FBLN2P98095 1184 aa30.51■■■□□ 2.47
TRMT2A-212ENST00000471040 ABCA10Q8WWZ4 1543 aa30.51■■■□□ 2.47
TRMT2A-212ENST00000471040 SNAPC4Q5SXM2 1469 aa30.5■■■□□ 2.47
TRMT2A-212ENST00000471040 GAPVD1Q14C86 1478 aa30.45■■■□□ 2.47
TRMT2A-212ENST00000471040 CHMP7Q8WUX9 453 aaPredicted RBP30.45■■■□□ 2.47
TRMT2A-212ENST00000471040 SYNJ2O15056 1496 aa30.44■■■□□ 2.46
TRMT2A-212ENST00000471040 WRNQ14191 1432 aaPredicted RBP eCLIP30.43■■■□□ 2.46
TRMT2A-212ENST00000471040 SYNJ1O43426 1573 aa30.38■■■□□ 2.45
TRMT2A-212ENST00000471040 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
TRMT2A-212ENST00000471040 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
TRMT2A-212ENST00000471040 BIVM-ERCC5R4GMW8 1640 aa30.37■■■□□ 2.45
TRMT2A-212ENST00000471040 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
TRMT2A-212ENST00000471040 PBRM1Q86U86 1689 aa30.34■■■□□ 2.45
TRMT2A-212ENST00000471040 CYB5RLQ6IPT4 315 aa30.31■■■□□ 2.44
TRMT2A-212ENST00000471040 ARAP1Q96P48 1450 aa30.28■■■□□ 2.44
TRMT2A-212ENST00000471040 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
TRMT2A-212ENST00000471040 GRIN2AQ12879 1464 aa30.13■■■□□ 2.41
TRMT2A-212ENST00000471040 FHAD1B1AJZ9 1412 aa30.12■■■□□ 2.41
TRMT2A-212ENST00000471040 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
TRMT2A-212ENST00000471040 NUP160Q12769 1436 aa30.08■■■□□ 2.41
TRMT2A-212ENST00000471040 CEP170Q5SW79 1584 aa29.95■■■□□ 2.39
TRMT2A-212ENST00000471040 SHROOM2Q13796 1616 aa29.9■■■□□ 2.38
TRMT2A-212ENST00000471040 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
TRMT2A-212ENST00000471040 KIF27Q86VH2 1401 aa29.82■■■□□ 2.36
TRMT2A-212ENST00000471040 IGF1RP08069 1367 aa29.78■■■□□ 2.36
TRMT2A-212ENST00000471040 JPH4Q96JJ6 628 aa29.76■■■□□ 2.35
TRMT2A-212ENST00000471040 ERCC6L2Q5T890 1561 aa29.76■■■□□ 2.35
TRMT2A-212ENST00000471040 CUL7Q14999 1698 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms