Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.25■□□□□ 0.832e-6■■■■■ 27.2
DDX52Q9Y2R4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.94■■□□□ 1.582e-7■■■■■ 27.1
DDX52Q9Y2R4 STRBP-203ENST00000407982 2751 ntTSL 1 (best)22.84■■□□□ 1.252e-7■■■■■ 27.1
DDX52Q9Y2R4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.992e-7■■■■■ 27.1
DDX52Q9Y2R4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.133e-7■■■■■ 27.1
DDX52Q9Y2R4 CBFA2T3-203ENST00000562719 539 ntTSL 512.38□□□□□ -0.431e-6■■■■■ 27
DDX52Q9Y2R4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.06■■■□□ 2.241e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-210ENST00000518480 558 ntTSL 419.38■□□□□ 0.691e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-225ENST00000522890 581 ntTSL 518.7■□□□□ 0.581e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-211ENST00000519228 729 ntTSL 417.93■□□□□ 0.461e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.421e-6■■■■■ 26.9
DDX52Q9Y2R4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.89■□□□□ 0.291e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.76■□□□□ 0.271e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-214ENST00000520230 582 ntTSL 415.87■□□□□ 0.131e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-206ENST00000518010 581 ntTSL 415.74■□□□□ 0.111e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-219ENST00000521544 709 ntTSL 515.35■□□□□ 0.051e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-213ENST00000519580 550 ntTSL 515.35■□□□□ 0.051e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC15.32■□□□□ 0.041e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-221ENST00000522377 1103 ntTSL 514.69□□□□□ -0.061e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC14.14□□□□□ -0.151e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-204ENST00000517599 2918 ntTSL 213.82□□□□□ -0.21e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-224ENST00000522738 530 ntTSL 513.55□□□□□ -0.241e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.381e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC12.21□□□□□ -0.451e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-215ENST00000520943 536 ntTSL 411.93□□□□□ -0.51e-6■■■■■ 26.9
DDX52Q9Y2R4 NDRG1-227ENST00000523892 562 ntTSL 410.51□□□□□ -0.731e-6■■■■■ 26.9
DDX52Q9Y2R4 SDF4-207ENST00000494748 3516 ntTSL 217.12■□□□□ 0.331e-6■■■■■ 26.9
DDX52Q9Y2R4 CAPN15-208ENST00000637507 1482 ntTSL 526.15■■□□□ 1.783e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.862e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-204ENST00000412051 1147 ntAPPRIS ALT2 TSL 225.31■■□□□ 1.642e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 323.8■■□□□ 1.42e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.272e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.18■■□□□ 1.142e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-207ENST00000488073 853 ntTSL 521.41■■□□□ 1.022e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-206ENST00000465681 2621 ntTSL 1 (best)18.59■□□□□ 0.572e-6■■■■■ 26.8
DDX52Q9Y2R4 C7orf50-205ENST00000444428 507 ntAPPRIS ALT2 TSL 318.39■□□□□ 0.532e-6■■■■■ 26.8
DDX52Q9Y2R4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.48■■□□□ 1.832e-6■■■■□ 26.7
DDX52Q9Y2R4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.57■■□□□ 1.362e-6■■■■□ 26.7
DDX52Q9Y2R4 SPPL2B-213ENST00000621568 1017 ntTSL 521.19■□□□□ 0.982e-6■■■■□ 26.7
DDX52Q9Y2R4 SPPL2B-201ENST00000585725 583 ntTSL 319.67■□□□□ 0.742e-6■■■■□ 26.7
DDX52Q9Y2R4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.432e-6■■■■□ 26.7
DDX52Q9Y2R4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.012e-6■■■■□ 26.7
DDX52Q9Y2R4 LINC00894-204ENST00000444489 2951 ntTSL 512.69□□□□□ -0.386e-6■■■■□ 26.5
DDX52Q9Y2R4 LINC00894-205ENST00000449111 3414 ntTSL 510.8□□□□□ -0.686e-6■■■■□ 26.5
DDX52Q9Y2R4 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.367e-6■■■■□ 26.4
DDX52Q9Y2R4 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.437e-6■■■■□ 26.4
DDX52Q9Y2R4 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.77e-6■■■■□ 26.4
DDX52Q9Y2R4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.69■■□□□ 1.862e-7■■■■□ 26.3
DDX52Q9Y2R4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.962e-6■■■■□ 26.3
DDX52Q9Y2R4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.692e-6■■■■□ 26.3
DDX52Q9Y2R4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.122e-6■■■■□ 26.3
DDX52Q9Y2R4 EHMT1-201ENST00000371394 2679 ntTSL 215.49■□□□□ 0.077e-6■■■■□ 26.3
DDX52Q9Y2R4 EHMT1-228ENST00000636027 3114 ntTSL 513.19□□□□□ -0.37e-6■■■■□ 26.3
DDX52Q9Y2R4 COL18A1-201ENST00000342220 3386 ntTSL 214.9□□□□□ -0.026e-7■■■■□ 26.2
DDX52Q9Y2R4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.541e-6■■■■□ 26.2
DDX52Q9Y2R4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.131e-6■■■■□ 26.2
DDX52Q9Y2R4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.152e-6■■■■□ 26.1
DDX52Q9Y2R4 PHF19-207ENST00000456291 888 ntTSL 328.08■■■□□ 2.093e-8■■■■□ 26.1
DDX52Q9Y2R4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.033e-8■■■■□ 26.1
DDX52Q9Y2R4 ST20-MTHFS-202ENST00000494999 632 ntTSL 326.06■■□□□ 1.763e-8■■■■□ 26.1
DDX52Q9Y2R4 ULK1-204ENST00000540647 1211 ntTSL 223.37■■□□□ 1.333e-6■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.47■■□□□ 1.193e-8■■■■□ 26.1
DDX52Q9Y2R4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.183e-8■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.13e-8■■■■□ 26.1
DDX52Q9Y2R4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.093e-8■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-205ENST00000593854 704 ntTSL 221.8■■□□□ 1.083e-8■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.043e-8■■■■□ 26.1
DDX52Q9Y2R4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.62■□□□□ 0.733e-8■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)17.99■□□□□ 0.473e-8■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-217ENST00000599737 1523 ntTSL 517.44■□□□□ 0.383e-8■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-214ENST00000599400 811 ntTSL 516.92■□□□□ 0.33e-8■■■■□ 26.1
DDX52Q9Y2R4 SH3GL1-203ENST00000593591 1036 ntTSL 416.82■□□□□ 0.283e-8■■■■□ 26.1
DDX52Q9Y2R4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.237e-6■■■■□ 26.1
DDX52Q9Y2R4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.227e-6■■■■□ 26.1
DDX52Q9Y2R4 STXBP2-219ENST00000600702 770 ntTSL 215.11■□□□□ 0.013e-8■■■■□ 26.1
DDX52Q9Y2R4 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.173e-8■■■■□ 26.1
DDX52Q9Y2R4 PHF19-204ENST00000436309 558 ntTSL 413.64□□□□□ -0.233e-8■■■■□ 26.1
DDX52Q9Y2R4 AKT1-212ENST00000555380 534 ntTSL 413.53□□□□□ -0.247e-6■■■■□ 26.1
DDX52Q9Y2R4 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC10.9□□□□□ -0.673e-8■■■■□ 26.1
DDX52Q9Y2R4 SH3GL1-204ENST00000598219 619 ntTSL 39.31□□□□□ -0.923e-8■■■■□ 26.1
DDX52Q9Y2R4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.211e-6■■■■□ 26
DDX52Q9Y2R4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.71■□□□□ 0.111e-6■■■■□ 26
DDX52Q9Y2R4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.762e-6■■■■□ 25.8
DDX52Q9Y2R4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.83e-6■■■■□ 25.7
DDX52Q9Y2R4 TMC6-206ENST00000586271 970 ntTSL 222.39■■□□□ 1.175e-7■■■■□ 25.7
DDX52Q9Y2R4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.35■■□□□ 1.172e-6■■■■□ 25.7
DDX52Q9Y2R4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.124e-6■■■■□ 25.6
DDX52Q9Y2R4 ARVCF-206ENST00000467828 258 ntTSL 322.84■■□□□ 1.251e-6■■■■□ 25.5
DDX52Q9Y2R4 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.094e-6■■■■□ 25.5
DDX52Q9Y2R4 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.094e-6■■■■□ 25.5
DDX52Q9Y2R4 AGPAT3-208ENST00000448287 454 ntTSL 314.43□□□□□ -0.14e-6■■■■□ 25.5
DDX52Q9Y2R4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.83e-7■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-203ENST00000558100 514 ntTSL 215.71■□□□□ 0.113e-6■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-207ENST00000560774 574 ntTSL 414.95□□□□□ -0.023e-6■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-204ENST00000558841 656 ntTSL 210.77□□□□□ -0.693e-6■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.123e-6■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-208ENST00000560802 552 ntTSL 47.62□□□□□ -1.193e-6■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-205ENST00000558891 583 ntTSL 34.22□□□□□ -1.733e-6■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-202ENST00000558063 583 ntTSL 43.66□□□□□ -1.823e-6■■■■□ 25.4
DDX52Q9Y2R4 MAPK6-206ENST00000560254 574 ntTSL 43.48□□□□□ -1.853e-6■■■■□ 25.4
Retrieved 100 of 4,483 protein–RNA pairs in 54.7 ms