RNA–Protein interactions for RNA: ENST00000613503.4

SPPL2B-209, Transcript of signal peptide peptidase like 2B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPPL2B, Length 3,456 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-209ENST00000613503 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
SPPL2B-209ENST00000613503 SUPT5HO00267 1087 aaKnown RBP23.39■■□□□ 1.33
SPPL2B-209ENST00000613503 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
SPPL2B-209ENST00000613503 HRCP23327 699 aa23.12■■□□□ 1.29
SPPL2B-209ENST00000613503 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
SPPL2B-209ENST00000613503 PPARGC1BQ86YN6 1023 aaKnown RBP22.87■■□□□ 1.25
SPPL2B-209ENST00000613503 CHIC1Q5VXU3 224 aa22.56■■□□□ 1.2
SPPL2B-209ENST00000613503 DCAF8L2P0C7V8 631 aa22.49■■□□□ 1.19
SPPL2B-209ENST00000613503 MYO15BQ96JP2 1530 aa22.37■■□□□ 1.17
SPPL2B-209ENST00000613503 LOC105371045A0A1W2PR82 267 aa22.27■■□□□ 1.16
SPPL2B-209ENST00000613503 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
SPPL2B-209ENST00000613503 TRIM26Q12899 539 aaPredicted RBP22.08■■□□□ 1.13
SPPL2B-209ENST00000613503 ZEB1P37275 1124 aaPredicted RBP21.9■■□□□ 1.1
SPPL2B-209ENST00000613503 EHMT2Q96KQ7 1210 aa21.88■■□□□ 1.09
SPPL2B-209ENST00000613503 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
SPPL2B-209ENST00000613503 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
SPPL2B-209ENST00000613503 FAM9AQ8IZU1 332 aaPredicted RBP21.75■■□□□ 1.07
SPPL2B-209ENST00000613503 ZCCHC6Q5VYS8 1495 aaKnown RBP21.63■■□□□ 1.05
SPPL2B-209ENST00000613503 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
SPPL2B-209ENST00000613503 CCER1Q8TC90 406 aaPredicted RBP21.42■■□□□ 1.02
SPPL2B-209ENST00000613503 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
SPPL2B-209ENST00000613503 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
SPPL2B-209ENST00000613503 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
SPPL2B-209ENST00000613503 NEUROD1Q13562 356 aa21.38■■□□□ 1.01
SPPL2B-209ENST00000613503 GTF3C3Q9Y5Q9 886 aa21.38■■□□□ 1.01
SPPL2B-209ENST00000613503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.37■■□□□ 1.01
SPPL2B-209ENST00000613503 MYT1Q01538 1121 aa21.34■■□□□ 1.01
SPPL2B-209ENST00000613503 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
SPPL2B-209ENST00000613503 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
SPPL2B-209ENST00000613503 YTHDC1Q96MU7 727 aaKnown RBP21.19■□□□□ 0.98
SPPL2B-209ENST00000613503 ABCC9O60706 1549 aa20.8■□□□□ 0.92
SPPL2B-209ENST00000613503 ZNF316A6NFI3 1004 aaPredicted RBP20.76■□□□□ 0.91
SPPL2B-209ENST00000613503 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
SPPL2B-209ENST00000613503 MIER1Q8N108 512 aa20.64■□□□□ 0.89
SPPL2B-209ENST00000613503 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
SPPL2B-209ENST00000613503 UBTFP17480 764 aaKnown RBP20.58■□□□□ 0.89
SPPL2B-209ENST00000613503 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.87
SPPL2B-209ENST00000613503 SCRIBQ14160 1630 aa20.45■□□□□ 0.86
SPPL2B-209ENST00000613503 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
SPPL2B-209ENST00000613503 APLP2Q06481 763 aa20.35■□□□□ 0.85
SPPL2B-209ENST00000613503 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
SPPL2B-209ENST00000613503 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
SPPL2B-209ENST00000613503 BCANQ96GW7 911 aa20.21■□□□□ 0.83
SPPL2B-209ENST00000613503 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
SPPL2B-209ENST00000613503 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
SPPL2B-209ENST00000613503 ANP32EQ9BTT0 268 aa20.13■□□□□ 0.81
SPPL2B-209ENST00000613503 TSHZ2Q9NRE2 1034 aa20.07■□□□□ 0.8
SPPL2B-209ENST00000613503 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.85e-6■■■□□ 14.6
SPPL2B-209ENST00000613503 MROH2BQ7Z745 1585 aa20.06■□□□□ 0.8
SPPL2B-209ENST00000613503 TNIKQ9UKE5 1360 aa20.05■□□□□ 0.8
SPPL2B-209ENST00000613503 BCL11AQ9H165 835 aa20.04■□□□□ 0.8
SPPL2B-209ENST00000613503 SOGA1O94964 1423 aa20.04■□□□□ 0.8
SPPL2B-209ENST00000613503 PABPN1Q86U42 306 aaKnown RBP eCLIP20.03■□□□□ 0.82e-6■■■■□ 21
SPPL2B-209ENST00000613503 CLSPNQ9HAW4 1339 aa20.02■□□□□ 0.8
SPPL2B-209ENST00000613503 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
SPPL2B-209ENST00000613503 NACADO15069 1562 aa19.97■□□□□ 0.79
SPPL2B-209ENST00000613503 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
SPPL2B-209ENST00000613503 ITGAEP38570 1179 aa19.96■□□□□ 0.79
SPPL2B-209ENST00000613503 NEFLP07196 543 aa19.94■□□□□ 0.78
SPPL2B-209ENST00000613503 FKBP8Q14318 412 aa19.94■□□□□ 0.78
SPPL2B-209ENST00000613503 WIZO95785 1651 aa19.94■□□□□ 0.78
SPPL2B-209ENST00000613503 RUSC2Q8N2Y8 1516 aa19.85■□□□□ 0.77
SPPL2B-209ENST00000613503 KCNH8Q96L42 1107 aa19.84■□□□□ 0.77
SPPL2B-209ENST00000613503 ERICH6Q7L0X2 663 aa19.81■□□□□ 0.76
SPPL2B-209ENST00000613503 GOLGA3Q08378 1498 aa19.8■□□□□ 0.76
SPPL2B-209ENST00000613503 CLIP1P30622 1438 aa19.8■□□□□ 0.76
SPPL2B-209ENST00000613503 DDX10Q13206 875 aaKnown RBP19.75■□□□□ 0.75
SPPL2B-209ENST00000613503 EEA1Q15075 1411 aa19.74■□□□□ 0.75
SPPL2B-209ENST00000613503 TRIM52Q96A61 297 aa19.71■□□□□ 0.75
SPPL2B-209ENST00000613503 RBM19Q9Y4C8 960 aaKnown RBP19.71■□□□□ 0.75
SPPL2B-209ENST00000613503 DHX57Q6P158 1386 aaKnown RBP19.64■□□□□ 0.73
SPPL2B-209ENST00000613503 HIRIP3Q9BW71 556 aaPredicted RBP19.63■□□□□ 0.73
SPPL2B-209ENST00000613503 BAZ1AQ9NRL2 1556 aaPredicted RBP19.62■□□□□ 0.73
SPPL2B-209ENST00000613503 VPS8Q8N3P4 1428 aa19.62■□□□□ 0.73
SPPL2B-209ENST00000613503 CEP164Q9UPV0 1460 aa19.58■□□□□ 0.73
SPPL2B-209ENST00000613503 KANK4Q5T7N3 995 aaPredicted RBP19.56■□□□□ 0.72
SPPL2B-209ENST00000613503 ANP32CO43423 234 aa19.54■□□□□ 0.72
SPPL2B-209ENST00000613503 IRX6P78412 446 aaPredicted RBP19.53■□□□□ 0.72
SPPL2B-209ENST00000613503 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
SPPL2B-209ENST00000613503 ATP1B4Q9UN42 357 aaPredicted RBP19.5■□□□□ 0.71
SPPL2B-209ENST00000613503 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
SPPL2B-209ENST00000613503 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
SPPL2B-209ENST00000613503 FAM50AQ14320 339 aaKnown RBP19.45■□□□□ 0.7
SPPL2B-209ENST00000613503 EIF4G1Q04637 1599 aaKnown RBP19.45■□□□□ 0.7
SPPL2B-209ENST00000613503 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
SPPL2B-209ENST00000613503 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
SPPL2B-209ENST00000613503 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
SPPL2B-209ENST00000613503 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
SPPL2B-209ENST00000613503 MSH5O43196 834 aa19.37■□□□□ 0.69
SPPL2B-209ENST00000613503 CCNB3Q8WWL7 1395 aa19.33■□□□□ 0.68
SPPL2B-209ENST00000613503 KIF21BO75037 1637 aa19.3■□□□□ 0.68
SPPL2B-209ENST00000613503 RAB3GAP2Q9H2M9 1393 aa19.29■□□□□ 0.68
SPPL2B-209ENST00000613503 NBR1Q14596 966 aa19.27■□□□□ 0.68
SPPL2B-209ENST00000613503 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
SPPL2B-209ENST00000613503 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
SPPL2B-209ENST00000613503 CCER2I3L3R5 266 aa19.25■□□□□ 0.67
SPPL2B-209ENST00000613503 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
SPPL2B-209ENST00000613503 DEKP35659 375 aaKnown RBP19.22■□□□□ 0.67
SPPL2B-209ENST00000613503 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
SPPL2B-209ENST00000613503 CNGB1Q14028 1251 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms