RNA–Protein interactions for RNA: ENST00000406259.1

ARVCF-203, Transcript of ARVCF, delta catenin family member, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARVCF, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARVCF-203ENST00000406259 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.48
ARVCF-203ENST00000406259 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
ARVCF-203ENST00000406259 ZCCHC6Q5VYS8 1495 aaKnown RBP25.69■■□□□ 1.7
ARVCF-203ENST00000406259 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
ARVCF-203ENST00000406259 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
ARVCF-203ENST00000406259 ABCC9O60706 1549 aa25.17■■□□□ 1.62
ARVCF-203ENST00000406259 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
ARVCF-203ENST00000406259 MYO15BQ96JP2 1530 aa24.73■■□□□ 1.55
ARVCF-203ENST00000406259 HRCP23327 699 aa24.67■■□□□ 1.54
ARVCF-203ENST00000406259 NACADO15069 1562 aa24.6■■□□□ 1.53
ARVCF-203ENST00000406259 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
ARVCF-203ENST00000406259 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
ARVCF-203ENST00000406259 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
ARVCF-203ENST00000406259 PPARGC1BQ86YN6 1023 aaKnown RBP24.32■■□□□ 1.48
ARVCF-203ENST00000406259 PCGF6Q9BYE7 350 aa24.29■■□□□ 1.48
ARVCF-203ENST00000406259 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
ARVCF-203ENST00000406259 UNC13AQ9UPW8 1703 aa23.97■■□□□ 1.43
ARVCF-203ENST00000406259 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
ARVCF-203ENST00000406259 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
ARVCF-203ENST00000406259 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
ARVCF-203ENST00000406259 BICRAQ9NZM4 1560 aa23.81■■□□□ 1.4
ARVCF-203ENST00000406259 MROH2BQ7Z745 1585 aa23.73■■□□□ 1.39
ARVCF-203ENST00000406259 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
ARVCF-203ENST00000406259 PELP1Q8IZL8 1130 aaKnown RBP23.55■■□□□ 1.36
ARVCF-203ENST00000406259 WIZO95785 1651 aa23.52■■□□□ 1.35
ARVCF-203ENST00000406259 BAZ1AQ9NRL2 1556 aaPredicted RBP23.51■■□□□ 1.35
ARVCF-203ENST00000406259 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
ARVCF-203ENST00000406259 TRIM26Q12899 539 aaPredicted RBP23.4■■□□□ 1.34
ARVCF-203ENST00000406259 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
ARVCF-203ENST00000406259 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
ARVCF-203ENST00000406259 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
ARVCF-203ENST00000406259 ATAD2BQ9ULI0 1458 aa23.09■■□□□ 1.29
ARVCF-203ENST00000406259 PEG3Q9GZU2 1588 aa23.08■■□□□ 1.28
ARVCF-203ENST00000406259 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
ARVCF-203ENST00000406259 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
ARVCF-203ENST00000406259 SMARCA2P51531 1590 aa23■■□□□ 1.27
ARVCF-203ENST00000406259 BAZ1BQ9UIG0 1483 aaKnown RBP22.91■■□□□ 1.26
ARVCF-203ENST00000406259 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
ARVCF-203ENST00000406259 TRIM41Q8WV44 630 aa22.8■■□□□ 1.24
ARVCF-203ENST00000406259 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
ARVCF-203ENST00000406259 ACIN1Q9UKV3 1341 aaKnown RBP22.76■■□□□ 1.23
ARVCF-203ENST00000406259 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
ARVCF-203ENST00000406259 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
ARVCF-203ENST00000406259 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
ARVCF-203ENST00000406259 CC2D2AQ9P2K1 1620 aa22.68■■□□□ 1.22
ARVCF-203ENST00000406259 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
ARVCF-203ENST00000406259 GTF3C3Q9Y5Q9 886 aa22.63■■□□□ 1.21
ARVCF-203ENST00000406259 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
ARVCF-203ENST00000406259 MYT1Q01538 1121 aa22.54■■□□□ 1.2
ARVCF-203ENST00000406259 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
ARVCF-203ENST00000406259 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
ARVCF-203ENST00000406259 DIEXFQ68CQ4 756 aaKnown RBP22.43■■□□□ 1.18
ARVCF-203ENST00000406259 CENPBP07199 599 aaPredicted RBP22.42■■□□□ 1.18
ARVCF-203ENST00000406259 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.184e-8■■■■■ 27.9
ARVCF-203ENST00000406259 CFTRP13569 1480 aa22.37■■□□□ 1.17
ARVCF-203ENST00000406259 SYNJ1O43426 1573 aa22.33■■□□□ 1.17
ARVCF-203ENST00000406259 SOGA1O94964 1423 aa22.3■■□□□ 1.16
ARVCF-203ENST00000406259 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
ARVCF-203ENST00000406259 RUSC2Q8N2Y8 1516 aa22.27■■□□□ 1.15
ARVCF-203ENST00000406259 NESP48681 1621 aa22.19■■□□□ 1.14
ARVCF-203ENST00000406259 YTHDC1Q96MU7 727 aaKnown RBP22.16■■□□□ 1.14
ARVCF-203ENST00000406259 TTBK1Q5TCY1 1321 aaPredicted RBP22.16■■□□□ 1.14
ARVCF-203ENST00000406259 CUX1P39880 1505 aa22.14■■□□□ 1.13
ARVCF-203ENST00000406259 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
ARVCF-203ENST00000406259 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
ARVCF-203ENST00000406259 BIVM-ERCC5R4GMW8 1640 aa22.05■■□□□ 1.12
ARVCF-203ENST00000406259 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
ARVCF-203ENST00000406259 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
ARVCF-203ENST00000406259 EEA1Q15075 1411 aa21.97■■□□□ 1.11
ARVCF-203ENST00000406259 ZNF316A6NFI3 1004 aaPredicted RBP21.97■■□□□ 1.11
ARVCF-203ENST00000406259 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
ARVCF-203ENST00000406259 MIER1Q8N108 512 aa21.9■■□□□ 1.1
ARVCF-203ENST00000406259 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
ARVCF-203ENST00000406259 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.08
ARVCF-203ENST00000406259 CEP164Q9UPV0 1460 aa21.82■■□□□ 1.08
ARVCF-203ENST00000406259 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
ARVCF-203ENST00000406259 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
ARVCF-203ENST00000406259 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
ARVCF-203ENST00000406259 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
ARVCF-203ENST00000406259 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
ARVCF-203ENST00000406259 GOLGA3Q08378 1498 aa21.78■■□□□ 1.08
ARVCF-203ENST00000406259 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.08
ARVCF-203ENST00000406259 DNMBPQ6XZF7 1577 aa21.77■■□□□ 1.08
ARVCF-203ENST00000406259 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
ARVCF-203ENST00000406259 CUX2O14529 1486 aa21.75■■□□□ 1.07
ARVCF-203ENST00000406259 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
ARVCF-203ENST00000406259 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
ARVCF-203ENST00000406259 KIF21BO75037 1637 aa21.73■■□□□ 1.07
ARVCF-203ENST00000406259 CEP162Q5TB80 1403 aa21.72■■□□□ 1.07
ARVCF-203ENST00000406259 PRXQ9BXM0 1461 aa21.7■■□□□ 1.06
ARVCF-203ENST00000406259 IGF1RP08069 1367 aa21.69■■□□□ 1.06
ARVCF-203ENST00000406259 RANGAP1P46060 587 aaPredicted RBP21.62■■□□□ 1.05
ARVCF-203ENST00000406259 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
ARVCF-203ENST00000406259 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.05
ARVCF-203ENST00000406259 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
ARVCF-203ENST00000406259 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
ARVCF-203ENST00000406259 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
ARVCF-203ENST00000406259 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
ARVCF-203ENST00000406259 SUPT16HQ9Y5B9 1047 aaKnown RBP21.52■■□□□ 1.04
ARVCF-203ENST00000406259 CLIP1P30622 1438 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms