RNA–Protein interactions for RNA: ENST00000598219.1

SH3GL1-204, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 3

Gene SH3GL1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-204ENST00000598219 AEBP2Q6ZN18 517 aaPredicted RBP22.12■■□□□ 1.13
SH3GL1-204ENST00000598219 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
SH3GL1-204ENST00000598219 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
SH3GL1-204ENST00000598219 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
SH3GL1-204ENST00000598219 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
SH3GL1-204ENST00000598219 FOXD1Q16676 465 aa17.63■□□□□ 0.41
SH3GL1-204ENST00000598219 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
SH3GL1-204ENST00000598219 CCDC180Q9P1Z9 1646 aa16.89■□□□□ 0.29
SH3GL1-204ENST00000598219 MSH5O43196 834 aa16.62■□□□□ 0.25
SH3GL1-204ENST00000598219 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
SH3GL1-204ENST00000598219 ADRA2BP18089 450 aa16.5■□□□□ 0.23
SH3GL1-204ENST00000598219 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
SH3GL1-204ENST00000598219 ABCC9O60706 1549 aa16.4■□□□□ 0.22
SH3GL1-204ENST00000598219 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
SH3GL1-204ENST00000598219 RB1CC1Q8TDY2 1594 aa15.89■□□□□ 0.13
SH3GL1-204ENST00000598219 NACADO15069 1562 aa15.88■□□□□ 0.13
SH3GL1-204ENST00000598219 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
SH3GL1-204ENST00000598219 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
SH3GL1-204ENST00000598219 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
SH3GL1-204ENST00000598219 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
SH3GL1-204ENST00000598219 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
SH3GL1-204ENST00000598219 SHROOM4Q9ULL8 1493 aa15.36■□□□□ 0.05
SH3GL1-204ENST00000598219 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
SH3GL1-204ENST00000598219 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
SH3GL1-204ENST00000598219 BICRAQ9NZM4 1560 aa15.31■□□□□ 0.04
SH3GL1-204ENST00000598219 PABPN1Q86U42 306 aaKnown RBP eCLIP15.3■□□□□ 0.04
SH3GL1-204ENST00000598219 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
SH3GL1-204ENST00000598219 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
SH3GL1-204ENST00000598219 DMRT2Q9Y5R5 561 aa15.06■□□□□ 0
SH3GL1-204ENST00000598219 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
SH3GL1-204ENST00000598219 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
SH3GL1-204ENST00000598219 PPP4R3CPQ6ZMV5 832 aa14.91□□□□□ -0.02
SH3GL1-204ENST00000598219 CC2D2AQ9P2K1 1620 aa14.85□□□□□ -0.03
SH3GL1-204ENST00000598219 KCNA4P22459 653 aa14.85□□□□□ -0.03
SH3GL1-204ENST00000598219 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
SH3GL1-204ENST00000598219 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
SH3GL1-204ENST00000598219 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
SH3GL1-204ENST00000598219 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
SH3GL1-204ENST00000598219 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
SH3GL1-204ENST00000598219 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
SH3GL1-204ENST00000598219 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
SH3GL1-204ENST00000598219 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
SH3GL1-204ENST00000598219 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
SH3GL1-204ENST00000598219 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
SH3GL1-204ENST00000598219 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
SH3GL1-204ENST00000598219 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
SH3GL1-204ENST00000598219 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.08
SH3GL1-204ENST00000598219 HOXD11P31277 338 aaPredicted RBP14.51□□□□□ -0.09
SH3GL1-204ENST00000598219 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
SH3GL1-204ENST00000598219 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
SH3GL1-204ENST00000598219 SLC24A1O60721 1099 aa14.45□□□□□ -0.1
SH3GL1-204ENST00000598219 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
SH3GL1-204ENST00000598219 WIZO95785 1651 aa14.37□□□□□ -0.11
SH3GL1-204ENST00000598219 SLC4A1APQ9BWU0 796 aaKnown RBP14.34□□□□□ -0.11
SH3GL1-204ENST00000598219 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
SH3GL1-204ENST00000598219 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
SH3GL1-204ENST00000598219 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
SH3GL1-204ENST00000598219 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
SH3GL1-204ENST00000598219 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
SH3GL1-204ENST00000598219 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
SH3GL1-204ENST00000598219 NESP48681 1621 aa14.17□□□□□ -0.14
SH3GL1-204ENST00000598219 CFTRP13569 1480 aa14.12□□□□□ -0.15
SH3GL1-204ENST00000598219 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
SH3GL1-204ENST00000598219 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
SH3GL1-204ENST00000598219 RNF39Q9H2S5 420 aa14.09□□□□□ -0.15
SH3GL1-204ENST00000598219 CUX2O14529 1486 aa14.09□□□□□ -0.15
SH3GL1-204ENST00000598219 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
SH3GL1-204ENST00000598219 FANCD2Q9BXW9 1451 aa14.03□□□□□ -0.16
SH3GL1-204ENST00000598219 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
SH3GL1-204ENST00000598219 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
SH3GL1-204ENST00000598219 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
SH3GL1-204ENST00000598219 MRC2Q9UBG0 1479 aa14□□□□□ -0.17
SH3GL1-204ENST00000598219 PRDM2Q13029 1718 aa13.98□□□□□ -0.17
SH3GL1-204ENST00000598219 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
SH3GL1-204ENST00000598219 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.176e-6■□□□□ 8.3
SH3GL1-204ENST00000598219 WDR62O43379 1518 aa13.95□□□□□ -0.18
SH3GL1-204ENST00000598219 AMER1Q5JTC6 1135 aaPredicted RBP13.93□□□□□ -0.18
SH3GL1-204ENST00000598219 RTN4Q9NQC3 1192 aaKnown RBP13.93□□□□□ -0.18
SH3GL1-204ENST00000598219 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
SH3GL1-204ENST00000598219 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
SH3GL1-204ENST00000598219 DNMBPQ6XZF7 1577 aa13.8□□□□□ -0.2
SH3GL1-204ENST00000598219 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
SH3GL1-204ENST00000598219 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
SH3GL1-204ENST00000598219 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
SH3GL1-204ENST00000598219 ZBTB22O15209 634 aa13.7□□□□□ -0.22
SH3GL1-204ENST00000598219 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
SH3GL1-204ENST00000598219 CUX1P39880 1505 aa13.67□□□□□ -0.22
SH3GL1-204ENST00000598219 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
SH3GL1-204ENST00000598219 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
SH3GL1-204ENST00000598219 FGD5Q6ZNL6 1462 aa13.64□□□□□ -0.23
SH3GL1-204ENST00000598219 SOGA1O94964 1423 aa13.64□□□□□ -0.23
SH3GL1-204ENST00000598219 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
SH3GL1-204ENST00000598219 TOP2BQ02880 1626 aa13.6□□□□□ -0.23
SH3GL1-204ENST00000598219 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
SH3GL1-204ENST00000598219 BIVM-ERCC5R4GMW8 1640 aa13.58□□□□□ -0.24
SH3GL1-204ENST00000598219 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
SH3GL1-204ENST00000598219 RAD54L2Q9Y4B4 1467 aa13.56□□□□□ -0.24
SH3GL1-204ENST00000598219 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
SH3GL1-204ENST00000598219 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
SH3GL1-204ENST00000598219 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms