Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 AC097381.1-201ENST00000429019 1296 ntBASIC10.64□□□□□ -0.71
MACF1Q9UPN3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
MACF1Q9UPN3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 AC142381.2-201ENST00000566120 298 ntBASIC10.63□□□□□ -0.71
MACF1Q9UPN3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 AC018755.3-202ENST00000596210 929 ntBASIC10.63□□□□□ -0.71
MACF1Q9UPN3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC10.63□□□□□ -0.71
MACF1Q9UPN3 AL031432.3-201ENST00000607698 485 ntBASIC10.62□□□□□ -0.71
MACF1Q9UPN3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
MACF1Q9UPN3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC10.62□□□□□ -0.71
MACF1Q9UPN3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC10.62□□□□□ -0.71
MACF1Q9UPN3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
MACF1Q9UPN3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC10.62□□□□□ -0.71
MACF1Q9UPN3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
MACF1Q9UPN3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
MACF1Q9UPN3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC10.61□□□□□ -0.71
MACF1Q9UPN3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
MACF1Q9UPN3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC10.61□□□□□ -0.71
MACF1Q9UPN3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC10.61□□□□□ -0.71
MACF1Q9UPN3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 AC087623.3-201ENST00000607047 1098 ntBASIC10.6□□□□□ -0.71
MACF1Q9UPN3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 AL117332.1-201ENST00000622628 974 ntBASIC10.6□□□□□ -0.71
MACF1Q9UPN3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC10.6□□□□□ -0.71
MACF1Q9UPN3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC10.59□□□□□ -0.71
MACF1Q9UPN3 AC110285.7-201ENST00000624417 1536 ntBASIC10.58□□□□□ -0.72
MACF1Q9UPN3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC10.58□□□□□ -0.72
MACF1Q9UPN3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC10.58□□□□□ -0.72
MACF1Q9UPN3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
MACF1Q9UPN3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.58□□□□□ -0.72
MACF1Q9UPN3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
MACF1Q9UPN3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC10.58□□□□□ -0.72
MACF1Q9UPN3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC10.57□□□□□ -0.72
MACF1Q9UPN3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC10.57□□□□□ -0.72
MACF1Q9UPN3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
MACF1Q9UPN3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC10.57□□□□□ -0.72
MACF1Q9UPN3 MIR4466-201ENST00000606121 54 ntBASIC10.57□□□□□ -0.72
MACF1Q9UPN3 AC106739.1-201ENST00000617035 715 ntBASIC10.57□□□□□ -0.72
MACF1Q9UPN3 BX664725.1-201ENST00000438252 379 ntBASIC10.56□□□□□ -0.72
MACF1Q9UPN3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 PBX2P1-201ENST00000493219 1291 ntBASIC10.56□□□□□ -0.72
MACF1Q9UPN3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
MACF1Q9UPN3 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
MACF1Q9UPN3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC10.54□□□□□ -0.72
MACF1Q9UPN3 ABHD17AP1-201ENST00000358206 933 ntBASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms