Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.79■□□□□ 0.92
ALX4Q9H161 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.79■□□□□ 0.92
ALX4Q9H161 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.79■□□□□ 0.92
ALX4Q9H161 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ALX4Q9H161 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ALX4Q9H161 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.79■□□□□ 0.92
ALX4Q9H161 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ALX4Q9H161 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ALX4Q9H161 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALX4Q9H161 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALX4Q9H161 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ALX4Q9H161 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.78■□□□□ 0.92
ALX4Q9H161 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALX4Q9H161 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALX4Q9H161 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ALX4Q9H161 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.77■□□□□ 0.92
ALX4Q9H161 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ALX4Q9H161 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ALX4Q9H161 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX4Q9H161 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX4Q9H161 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX4Q9H161 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.76■□□□□ 0.91
ALX4Q9H161 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ALX4Q9H161 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ALX4Q9H161 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.75■□□□□ 0.91
ALX4Q9H161 AP006261.1-201ENST00000584783 668 ntBASIC20.75■□□□□ 0.91
ALX4Q9H161 AC005559.1-201ENST00000589661 871 ntBASIC20.75■□□□□ 0.91
ALX4Q9H161 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.75■□□□□ 0.91
ALX4Q9H161 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
ALX4Q9H161 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ALX4Q9H161 AP004609.3-201ENST00000610705 1884 ntBASIC20.75■□□□□ 0.91
ALX4Q9H161 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ALX4Q9H161 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 DUX4L28-201ENST00000623687 678 ntBASIC20.74■□□□□ 0.91
ALX4Q9H161 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ALX4Q9H161 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ALX4Q9H161 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.73■□□□□ 0.91
ALX4Q9H161 AC142381.3-201ENST00000568208 1670 ntBASIC20.73■□□□□ 0.91
ALX4Q9H161 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ALX4Q9H161 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.73■□□□□ 0.91
ALX4Q9H161 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALX4Q9H161 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALX4Q9H161 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ALX4Q9H161 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALX4Q9H161 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALX4Q9H161 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ALX4Q9H161 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALX4Q9H161 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALX4Q9H161 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ALX4Q9H161 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ALX4Q9H161 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.71■□□□□ 0.91
ALX4Q9H161 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ALX4Q9H161 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALX4Q9H161 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALX4Q9H161 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
ALX4Q9H161 MIR3665-201ENST00000578708 105 ntBASIC20.7■□□□□ 0.9
ALX4Q9H161 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALX4Q9H161 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ALX4Q9H161 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALX4Q9H161 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALX4Q9H161 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALX4Q9H161 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALX4Q9H161 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALX4Q9H161 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALX4Q9H161 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.69■□□□□ 0.9
ALX4Q9H161 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALX4Q9H161 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ALX4Q9H161 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALX4Q9H161 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ALX4Q9H161 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.68■□□□□ 0.9
ALX4Q9H161 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALX4Q9H161 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.68■□□□□ 0.9
ALX4Q9H161 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALX4Q9H161 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALX4Q9H161 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.68■□□□□ 0.9
ALX4Q9H161 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALX4Q9H161 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALX4Q9H161 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALX4Q9H161 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALX4Q9H161 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALX4Q9H161 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ALX4Q9H161 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.67■□□□□ 0.9
ALX4Q9H161 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALX4Q9H161 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALX4Q9H161 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALX4Q9H161 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.66■□□□□ 0.9
ALX4Q9H161 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ALX4Q9H161 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
ALX4Q9H161 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.65■□□□□ 0.9
ALX4Q9H161 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ALX4Q9H161 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.65■□□□□ 0.9
ALX4Q9H161 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms