Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.26■■□□□ 1.47
SCUBE1Q8IWY4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCUBE1Q8IWY4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SCUBE1Q8IWY4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.25■■□□□ 1.47
SCUBE1Q8IWY4 AC135983.2-203ENST00000454486 1613 ntBASIC24.24■■□□□ 1.47
SCUBE1Q8IWY4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SCUBE1Q8IWY4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.24■■□□□ 1.47
SCUBE1Q8IWY4 LINC01971-201ENST00000617888 1048 ntBASIC24.24■■□□□ 1.47
SCUBE1Q8IWY4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
SCUBE1Q8IWY4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SCUBE1Q8IWY4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SCUBE1Q8IWY4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 AC100797.4-201ENST00000631653 1827 ntBASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SCUBE1Q8IWY4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.21■■□□□ 1.47
SCUBE1Q8IWY4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SCUBE1Q8IWY4 MIR7108-201ENST00000614319 87 ntBASIC24.21■■□□□ 1.47
SCUBE1Q8IWY4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.2■■□□□ 1.47
SCUBE1Q8IWY4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
SCUBE1Q8IWY4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SCUBE1Q8IWY4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SCUBE1Q8IWY4 WHAMMP2-203ENST00000563942 1603 ntBASIC24.2■■□□□ 1.46
SCUBE1Q8IWY4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
SCUBE1Q8IWY4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
SCUBE1Q8IWY4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SCUBE1Q8IWY4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.19■■□□□ 1.46
SCUBE1Q8IWY4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.19■■□□□ 1.46
SCUBE1Q8IWY4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCUBE1Q8IWY4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCUBE1Q8IWY4 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
SCUBE1Q8IWY4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SCUBE1Q8IWY4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SCUBE1Q8IWY4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCUBE1Q8IWY4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
SCUBE1Q8IWY4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCUBE1Q8IWY4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SCUBE1Q8IWY4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 AP002414.2-202ENST00000590929 1450 ntBASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.16■■□□□ 1.46
SCUBE1Q8IWY4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.15■■□□□ 1.46
SCUBE1Q8IWY4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.15■■□□□ 1.46
SCUBE1Q8IWY4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SCUBE1Q8IWY4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.14■■□□□ 1.46
SCUBE1Q8IWY4 DUX4L11-201ENST00000611504 1267 ntBASIC24.14■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L12-201ENST00000614593 1267 ntBASIC24.14■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L14-201ENST00000621227 1267 ntBASIC24.14■■□□□ 1.45
SCUBE1Q8IWY4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SCUBE1Q8IWY4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SCUBE1Q8IWY4 DUSP8P4-201ENST00000399538 1761 ntBASIC24.14■■□□□ 1.45
SCUBE1Q8IWY4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SCUBE1Q8IWY4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCUBE1Q8IWY4 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
SCUBE1Q8IWY4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SCUBE1Q8IWY4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SCUBE1Q8IWY4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SCUBE1Q8IWY4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.11■■□□□ 1.45
SCUBE1Q8IWY4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCUBE1Q8IWY4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.11■■□□□ 1.45
SCUBE1Q8IWY4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SCUBE1Q8IWY4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SCUBE1Q8IWY4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCUBE1Q8IWY4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SCUBE1Q8IWY4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SCUBE1Q8IWY4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCUBE1Q8IWY4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SCUBE1Q8IWY4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.09■■□□□ 1.45
SCUBE1Q8IWY4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.09■■□□□ 1.45
SCUBE1Q8IWY4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.09■■□□□ 1.45
SCUBE1Q8IWY4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SCUBE1Q8IWY4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L13-201ENST00000554103 1267 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L15-201ENST00000611059 1267 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L23-201ENST00000615195 1269 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L24-201ENST00000617576 1269 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L22-201ENST00000618238 1269 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L20-201ENST00000619712 1269 ntBASIC24.08■■□□□ 1.45
SCUBE1Q8IWY4 DUX4L21-201ENST00000622058 1269 ntBASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms