Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB5CP51148 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB5CP51148 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.82■□□□□ 0.76
RAB5CP51148 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB5CP51148 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB5CP51148 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB5CP51148 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB5CP51148 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB5CP51148 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB5CP51148 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB5CP51148 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RAB5CP51148 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB5CP51148 AC142381.3-201ENST00000568208 1670 ntBASIC19.8■□□□□ 0.76
RAB5CP51148 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5CP51148 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5CP51148 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5CP51148 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5CP51148 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5CP51148 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5CP51148 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5CP51148 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5CP51148 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5CP51148 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5CP51148 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB5CP51148 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB5CP51148 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5CP51148 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5CP51148 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5CP51148 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.77■□□□□ 0.76
RAB5CP51148 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5CP51148 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5CP51148 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5CP51148 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
RAB5CP51148 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5CP51148 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5CP51148 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5CP51148 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5CP51148 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5CP51148 AC133561.1-201ENST00000568600 2415 ntBASIC19.76■□□□□ 0.75
RAB5CP51148 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.75■□□□□ 0.75
RAB5CP51148 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB5CP51148 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB5CP51148 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB5CP51148 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB5CP51148 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RAB5CP51148 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RAB5CP51148 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RAB5CP51148 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB5CP51148 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RAB5CP51148 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAB5CP51148 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB5CP51148 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB5CP51148 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB5CP51148 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB5CP51148 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB5CP51148 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB5CP51148 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RAB5CP51148 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RAB5CP51148 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB5CP51148 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAB5CP51148 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB5CP51148 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB5CP51148 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB5CP51148 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB5CP51148 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB5CP51148 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB5CP51148 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB5CP51148 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB5CP51148 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5CP51148 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.71■□□□□ 0.75
RAB5CP51148 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5CP51148 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5CP51148 AC006077.2-201ENST00000623591 457 ntBASIC19.71■□□□□ 0.75
RAB5CP51148 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RAB5CP51148 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5CP51148 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAB5CP51148 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RAB5CP51148 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB5CP51148 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB5CP51148 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RAB5CP51148 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB5CP51148 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB5CP51148 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB5CP51148 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB5CP51148 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB5CP51148 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB5CP51148 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB5CP51148 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB5CP51148 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB5CP51148 AL139125.2-201ENST00000623134 1869 ntBASIC19.69■□□□□ 0.74
RAB5CP51148 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB5CP51148 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
RAB5CP51148 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB5CP51148 DYNLL1-208ENST00000550178 581 ntBASIC19.68■□□□□ 0.74
RAB5CP51148 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB5CP51148 AP004609.3-201ENST00000610705 1884 ntBASIC19.68■□□□□ 0.74
RAB5CP51148 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB5CP51148 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
RAB5CP51148 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.67■□□□□ 0.74
RAB5CP51148 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms