Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YDR327WYDR327W 327 nt6.3□□□□□ -1.4
SSN8P47821 HSP12YFL014W 330 nt6.3□□□□□ -1.4
SSN8P47821 YKL147CYKL147C 618 nt6.3□□□□□ -1.4
SSN8P47821 GEF1YJR040W 2340 nt6.3□□□□□ -1.4
SSN8P47821 BDS1YOL164W 1941 nt6.29□□□□□ -1.4
SSN8P47821 YDR476CYDR476C 675 nt6.29□□□□□ -1.4
SSN8P47821 tL(UAA)B1tL(UAA)B1 84 nt6.29□□□□□ -1.4
SSN8P47821 tL(UAA)B2tL(UAA)B2 84 nt6.29□□□□□ -1.4
SSN8P47821 tL(UAA)DtL(UAA)D 84 nt6.29□□□□□ -1.4
SSN8P47821 SUP51tL(UAA)J 84 nt6.29□□□□□ -1.4
SSN8P47821 tL(UAA)KtL(UAA)K 84 nt6.29□□□□□ -1.4
SSN8P47821 tL(UAA)LtL(UAA)L 84 nt6.29□□□□□ -1.4
SSN8P47821 tL(UAA)NtL(UAA)N 84 nt6.29□□□□□ -1.4
SSN8P47821 DSC3YOR223W 879 nt6.29□□□□□ -1.4
SSN8P47821 QNS1YHR074W 2145 nt6.29□□□□□ -1.4
SSN8P47821 NUP57YGR119C 1626 nt6.28□□□□□ -1.4
SSN8P47821 GSH1YJL101C 2037 nt6.28□□□□□ -1.4
SSN8P47821 ERG24YNL280C 1317 nt6.28□□□□□ -1.4
SSN8P47821 FAF1YIL019W 1041 nt6.28□□□□□ -1.4
SSN8P47821 PRY2YKR013W 990 nt6.28□□□□□ -1.4
SSN8P47821 SUR7YML052W 909 nt6.28□□□□□ -1.4
SSN8P47821 OPI11YPR044C 354 nt6.28□□□□□ -1.4
SSN8P47821 RMD9YGL107C 1941 nt6.27□□□□□ -1.41
SSN8P47821 LSG1YGL099W 1923 nt6.27□□□□□ -1.41
SSN8P47821 OSM1YJR051W 1506 nt6.26□□□□□ -1.41
SSN8P47821 NCA3YJL116C 1014 nt6.26□□□□□ -1.41
SSN8P47821 YJR142WYJR142W 1029 nt6.26□□□□□ -1.41
SSN8P47821 IDP3YNL009W 1263 nt6.26□□□□□ -1.41
SSN8P47821 CDC3YLR314C 1563 nt6.26□□□□□ -1.41
SSN8P47821 SAC6YDR129C 1929 nt6.25□□□□□ -1.41
SSN8P47821 RPL2BYIL018W 765 nt6.25□□□□□ -1.41
SSN8P47821 FUS3YBL016W 1062 nt6.25□□□□□ -1.41
SSN8P47821 YOR343CYOR343C 327 nt6.25□□□□□ -1.41
SSN8P47821 HXT17YNR072W 1695 nt6.25□□□□□ -1.41
SSN8P47821 YPR204WYPR204W 3099 nt6.25□□□□□ -1.41
SSN8P47821 KDX1YKL161C 1302 nt6.25□□□□□ -1.41
SSN8P47821 YHC3YJL059W 1227 nt6.24□□□□□ -1.41
SSN8P47821 LIP5YOR196C 1245 nt6.24□□□□□ -1.41
SSN8P47821 MCH2YKL221W 1422 nt6.24□□□□□ -1.41
SSN8P47821 HRB1YNL004W 1365 nt6.23□□□□□ -1.41
SSN8P47821 SKP1YDR328C 585 nt6.23□□□□□ -1.41
SSN8P47821 YAL045CYAL045C 309 nt6.23□□□□□ -1.41
SSN8P47821 MPA43YNL249C 1629 nt6.22□□□□□ -1.41
SSN8P47821 EXG2YDR261C 1689 nt6.22□□□□□ -1.41
SSN8P47821 MSI1YBR195C 1269 nt6.21□□□□□ -1.42
SSN8P47821 SKI2YLR398C 3864 nt6.21□□□□□ -1.42
SSN8P47821 YGL081WYGL081W 963 nt6.2□□□□□ -1.42
SSN8P47821 NMA2YGR010W 1188 nt6.2□□□□□ -1.42
SSN8P47821 PIL1YGR086C 1020 nt6.2□□□□□ -1.42
SSN8P47821 ARC35YNR035C 1029 nt6.2□□□□□ -1.42
SSN8P47821 BZZ1YHR114W 1902 nt6.2□□□□□ -1.42
SSN8P47821 PCS60YBR222C 1632 nt6.2□□□□□ -1.42
SSN8P47821 STE13YOR219C 2796 nt6.2□□□□□ -1.42
SSN8P47821 YDR387CYDR387C 1668 nt6.2□□□□□ -1.42
SSN8P47821 RIX7YLL034C 2514 nt6.19□□□□□ -1.42
SSN8P47821 BUD20YLR074C 501 nt6.19□□□□□ -1.42
SSN8P47821 ESC8YOL017W 2145 nt6.19□□□□□ -1.42
SSN8P47821 YJL213WYJL213W 996 nt6.18□□□□□ -1.42
SSN8P47821 CCW12YLR110C 402 nt6.18□□□□□ -1.42
SSN8P47821 YBR124WYBR124W 360 nt6.18□□□□□ -1.42
SSN8P47821 TEL2YGR099W 2067 nt6.18□□□□□ -1.42
SSN8P47821 YAL016C-AYAL016C-A 315 nt6.17□□□□□ -1.42
SSN8P47821 PUS5YLR165C 765 nt6.17□□□□□ -1.42
SSN8P47821 TAH11YJR046W 1815 nt6.17□□□□□ -1.42
SSN8P47821 SUB2YDL084W 1341 nt6.17□□□□□ -1.42
SSN8P47821 XBP1YIL101C 1944 nt6.17□□□□□ -1.42
SSN8P47821 MHP1YJL042W 4197 nt6.16□□□□□ -1.42
SSN8P47821 RBS1YDL189W 1374 nt6.16□□□□□ -1.42
SSN8P47821 SUF3tG(CCC)D 72 nt6.15□□□□□ -1.42
SSN8P47821 HSP150YJL159W 1242 nt6.15□□□□□ -1.42
SSN8P47821 YLR358CYLR358C 564 nt6.15□□□□□ -1.42
SSN8P47821 RDR1YOR380W 1641 nt6.14□□□□□ -1.43
SSN8P47821 YEL009C-AYEL009C-A 408 nt6.14□□□□□ -1.43
SSN8P47821 MTR3YGR158C 753 nt6.14□□□□□ -1.43
SSN8P47821 CIS3YJL158C 684 nt6.14□□□□□ -1.43
SSN8P47821 YNL165WYNL165W 1221 nt6.14□□□□□ -1.43
SSN8P47821 CCT3YJL014W 1605 nt6.14□□□□□ -1.43
SSN8P47821 CRZ1YNL027W 2037 nt6.13□□□□□ -1.43
SSN8P47821 DOC1YGL240W 753 nt6.13□□□□□ -1.43
SSN8P47821 PAM17YKR065C 594 nt6.13□□□□□ -1.43
SSN8P47821 YMR074CYMR074C 438 nt6.13□□□□□ -1.43
SSN8P47821 HOG1YLR113W 1308 nt6.13□□□□□ -1.43
SSN8P47821 CDC7YDL017W 1524 nt6.13□□□□□ -1.43
SSN8P47821 YOL036WYOL036W 2286 nt6.13□□□□□ -1.43
SSN8P47821 CIT2YCR005C 1383 nt6.12□□□□□ -1.43
SSN8P47821 PET117YER058W 324 nt6.12□□□□□ -1.43
SSN8P47821 TRP5YGL026C 2124 nt6.12□□□□□ -1.43
SSN8P47821 OPI8YKR035C 642 nt6.12□□□□□ -1.43
SSN8P47821 YMR279CYMR279C 1623 nt6.12□□□□□ -1.43
SSN8P47821 MRP51YPL118W 1035 nt6.12□□□□□ -1.43
SSN8P47821 SNT309YPR101W 528 nt6.12□□□□□ -1.43
SSN8P47821 LAT1YNL071W 1449 nt6.11□□□□□ -1.43
SSN8P47821 IRC5YFR038W 2562 nt6.11□□□□□ -1.43
SSN8P47821 PPM1YDR435C 987 nt6.11□□□□□ -1.43
SSN8P47821 YML122CYML122C 381 nt6.11□□□□□ -1.43
SSN8P47821 SDH8YBR269C 417 nt6.11□□□□□ -1.43
SSN8P47821 KEL1YHR158C 3495 nt6.11□□□□□ -1.43
SSN8P47821 IMA5YJL216C 1746 nt6.11□□□□□ -1.43
SSN8P47821 KAE1YKR038C 1161 nt6.1□□□□□ -1.43
SSN8P47821 SUN4YNL066W 1263 nt6.1□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 24.5 ms