Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RNF40O75150 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.41■■□□□ 1.82
RNF40O75150 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
RNF40O75150 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.41■■□□□ 1.82
RNF40O75150 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF40O75150 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.4■■□□□ 1.82
RNF40O75150 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RNF40O75150 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
RNF40O75150 RNF126P1-201ENST00000567452 1320 ntBASIC26.39■■□□□ 1.82
RNF40O75150 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
RNF40O75150 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNF40O75150 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF40O75150 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
RNF40O75150 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF40O75150 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF40O75150 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
RNF40O75150 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.37■■□□□ 1.81
RNF40O75150 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF40O75150 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RNF40O75150 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RNF40O75150 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RNF40O75150 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
RNF40O75150 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF40O75150 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RNF40O75150 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RNF40O75150 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.35■■□□□ 1.81
RNF40O75150 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.35■■□□□ 1.81
RNF40O75150 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.35■■□□□ 1.81
RNF40O75150 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RNF40O75150 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF40O75150 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF40O75150 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.34■■□□□ 1.81
RNF40O75150 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
RNF40O75150 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF40O75150 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RNF40O75150 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF40O75150 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF40O75150 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
RNF40O75150 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF40O75150 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.33■■□□□ 1.81
RNF40O75150 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RNF40O75150 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RNF40O75150 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.33■■□□□ 1.8
RNF40O75150 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
RNF40O75150 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
RNF40O75150 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
RNF40O75150 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RNF40O75150 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RNF40O75150 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.31■■□□□ 1.8
RNF40O75150 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.31■■□□□ 1.8
RNF40O75150 AC127502.1-201ENST00000399971 1502 ntBASIC26.31■■□□□ 1.8
RNF40O75150 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF40O75150 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.31■■□□□ 1.8
RNF40O75150 AC022413.1-201ENST00000624602 984 ntBASIC26.31■■□□□ 1.8
RNF40O75150 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF40O75150 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
RNF40O75150 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.31■■□□□ 1.8
RNF40O75150 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RNF40O75150 AC091060.1-201ENST00000623524 1766 ntBASIC26.3■■□□□ 1.8
RNF40O75150 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.3■■□□□ 1.8
RNF40O75150 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RNF40O75150 AC020928.2-201ENST00000588717 2197 ntBASIC26.29■■□□□ 1.8
RNF40O75150 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.29■■□□□ 1.8
RNF40O75150 LINC01003-201ENST00000564834 1764 ntBASIC26.29■■□□□ 1.8
RNF40O75150 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
RNF40O75150 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RNF40O75150 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.29■■□□□ 1.8
RNF40O75150 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
RNF40O75150 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.28■■□□□ 1.8
RNF40O75150 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RNF40O75150 AC008813.1-201ENST00000536597 885 ntBASIC26.28■■□□□ 1.8
RNF40O75150 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNF40O75150 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RNF40O75150 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.27■■□□□ 1.8
RNF40O75150 WHAMMP2-203ENST00000563942 1603 ntBASIC26.27■■□□□ 1.8
RNF40O75150 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.27■■□□□ 1.8
RNF40O75150 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF40O75150 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RNF40O75150 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.26■■□□□ 1.79
RNF40O75150 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RNF40O75150 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.25■■□□□ 1.79
RNF40O75150 AC135983.2-203ENST00000454486 1613 ntBASIC26.25■■□□□ 1.79
RNF40O75150 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.25■■□□□ 1.79
RNF40O75150 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
RNF40O75150 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF40O75150 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RNF40O75150 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RNF40O75150 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RNF40O75150 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
RNF40O75150 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.22■■□□□ 1.79
RNF40O75150 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.22■■□□□ 1.79
RNF40O75150 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.22■■□□□ 1.79
RNF40O75150 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms