Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNAP47Q5SQN1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 AL845331.1-201ENST00000424978 1190 ntBASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 RN7SL510P-201ENST00000581311 263 ntBASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 AC124864.1-201ENST00000623408 392 ntBASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNAP47Q5SQN1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 LINC00167-201ENST00000530583 1419 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 IGHGP-201ENST00000390555 1178 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 DRAXINP1-201ENST00000437611 948 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 FOSL1P1-201ENST00000511041 816 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 AC074051.2-201ENST00000565115 352 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 AC111152.3-201ENST00000569699 673 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 AC090616.6-201ENST00000582640 721 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 AC083906.6-201ENST00000641366 219 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 AL163051.1-201ENST00000569214 1512 ntBASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.65■□□□□ 0.42
SNAP47Q5SQN1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNAP47Q5SQN1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNAP47Q5SQN1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNAP47Q5SQN1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNAP47Q5SQN1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNAP47Q5SQN1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 AC104819.1-201ENST00000504587 486 ntBASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 UNC93B7-201ENST00000509439 705 ntBASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 AC138894.3-201ENST00000603787 634 ntBASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 AL732292.2-201ENST00000609649 430 ntBASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNAP47Q5SQN1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 758.8 ms