RNA–Protein interactions for RNA: ENST00000372292.7

SFTPD-201, Transcript of surfactant protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFTPD, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPD-201ENST00000372292 NISCHQ9Y2I1 1504 aa43.27■■■■■ 4.52
SFTPD-201ENST00000372292 CCDC180Q9P1Z9 1646 aa38.37■■■■□ 3.73
SFTPD-201ENST00000372292 ABCC9O60706 1549 aa37.36■■■■□ 3.57
SFTPD-201ENST00000372292 DCAF8L2P0C7V8 631 aa36.32■■■■□ 3.4
SFTPD-201ENST00000372292 NACADO15069 1562 aa36.11■■■■□ 3.37
SFTPD-201ENST00000372292 RB1CC1Q8TDY2 1594 aa36.1■■■■□ 3.37
SFTPD-201ENST00000372292 ZCCHC6Q5VYS8 1495 aaKnown RBP36.03■■■■□ 3.36
SFTPD-201ENST00000372292 MYO15BQ96JP2 1530 aa35.95■■■■□ 3.35
SFTPD-201ENST00000372292 DCAF1Q9Y4B6 1507 aa35.85■■■■□ 3.33
SFTPD-201ENST00000372292 UNC13AQ9UPW8 1703 aa35.06■■■■□ 3.2
SFTPD-201ENST00000372292 PABPN1Q86U42 306 aaKnown RBP eCLIP35.01■■■■□ 3.2
SFTPD-201ENST00000372292 SCRIBQ14160 1630 aa34.98■■■■□ 3.19
SFTPD-201ENST00000372292 BICRAQ9NZM4 1560 aa34.81■■■■□ 3.16
SFTPD-201ENST00000372292 SHROOM4Q9ULL8 1493 aa34.67■■■■□ 3.14
SFTPD-201ENST00000372292 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
SFTPD-201ENST00000372292 EIF4G1Q04637 1599 aaKnown RBP33.98■■■■□ 3.03
SFTPD-201ENST00000372292 CC2D2AQ9P2K1 1620 aa33.78■■■■□ 3
SFTPD-201ENST00000372292 CECR2Q9BXF3 1484 aa33.61■■■□□ 2.97
SFTPD-201ENST00000372292 BAZ1AQ9NRL2 1556 aaPredicted RBP33.58■■■□□ 2.97
SFTPD-201ENST00000372292 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
SFTPD-201ENST00000372292 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
SFTPD-201ENST00000372292 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
SFTPD-201ENST00000372292 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
SFTPD-201ENST00000372292 MROH2BQ7Z745 1585 aa33.28■■■□□ 2.92
SFTPD-201ENST00000372292 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
SFTPD-201ENST00000372292 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
SFTPD-201ENST00000372292 BAZ1BQ9UIG0 1483 aaKnown RBP33.1■■■□□ 2.89
SFTPD-201ENST00000372292 RSF1Q96T23 1441 aaPredicted RBP33.04■■■□□ 2.88
SFTPD-201ENST00000372292 WIZO95785 1651 aa32.93■■■□□ 2.86
SFTPD-201ENST00000372292 TOP2AP11388 1531 aaKnown RBP32.65■■■□□ 2.82
SFTPD-201ENST00000372292 SUPT5HO00267 1087 aaKnown RBP32.5■■■□□ 2.79
SFTPD-201ENST00000372292 LAMC3Q9Y6N6 1575 aa32.4■■■□□ 2.78
SFTPD-201ENST00000372292 CADPSQ9ULU8 1353 aa32.39■■■□□ 2.78
SFTPD-201ENST00000372292 ERCC6Q03468 1493 aa32.31■■■□□ 2.76
SFTPD-201ENST00000372292 NESP48681 1621 aa32.31■■■□□ 2.76
SFTPD-201ENST00000372292 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
SFTPD-201ENST00000372292 PDS5BQ9NTI5 1447 aa32.28■■■□□ 2.76
SFTPD-201ENST00000372292 CFTRP13569 1480 aa32.17■■■□□ 2.74
SFTPD-201ENST00000372292 FANCD2Q9BXW9 1451 aa31.97■■■□□ 2.71
SFTPD-201ENST00000372292 CEP164Q9UPV0 1460 aa31.92■■■□□ 2.7
SFTPD-201ENST00000372292 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
SFTPD-201ENST00000372292 PRDM2Q13029 1718 aa31.86■■■□□ 2.69
SFTPD-201ENST00000372292 CUX2O14529 1486 aa31.86■■■□□ 2.69
SFTPD-201ENST00000372292 MRC2Q9UBG0 1479 aa31.82■■■□□ 2.68
SFTPD-201ENST00000372292 THOC2Q8NI27 1593 aaKnown RBP31.75■■■□□ 2.67
SFTPD-201ENST00000372292 WDR62O43379 1518 aa31.65■■■□□ 2.66
SFTPD-201ENST00000372292 ABCC8Q09428 1581 aa31.64■■■□□ 2.65
SFTPD-201ENST00000372292 URB2Q14146 1524 aaKnown RBP31.54■■■□□ 2.64
SFTPD-201ENST00000372292 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
SFTPD-201ENST00000372292 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
SFTPD-201ENST00000372292 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
SFTPD-201ENST00000372292 WRNQ14191 1432 aaPredicted RBP eCLIP31.22■■■□□ 2.59
SFTPD-201ENST00000372292 CUX1P39880 1505 aa31.21■■■□□ 2.59
SFTPD-201ENST00000372292 SOGA1O94964 1423 aa31.17■■■□□ 2.58
SFTPD-201ENST00000372292 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
SFTPD-201ENST00000372292 FGD5Q6ZNL6 1462 aa31.14■■■□□ 2.57
SFTPD-201ENST00000372292 TOP2BQ02880 1626 aa31.06■■■□□ 2.56
SFTPD-201ENST00000372292 RAD54L2Q9Y4B4 1467 aa31.02■■■□□ 2.56
SFTPD-201ENST00000372292 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
SFTPD-201ENST00000372292 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
SFTPD-201ENST00000372292 SYNJ1O43426 1573 aa30.97■■■□□ 2.55
SFTPD-201ENST00000372292 ZNF608Q9ULD9 1512 aaPredicted RBP30.97■■■□□ 2.55
SFTPD-201ENST00000372292 WDR97A6NE52 1622 aa30.92■■■□□ 2.54
SFTPD-201ENST00000372292 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
SFTPD-201ENST00000372292 AQRO60306 1485 aaKnown RBP eCLIP30.9■■■□□ 2.54
SFTPD-201ENST00000372292 ABCA10Q8WWZ4 1543 aa30.87■■■□□ 2.53
SFTPD-201ENST00000372292 EIF4G3O43432 1585 aaKnown RBP30.85■■■□□ 2.53
SFTPD-201ENST00000372292 TRIM41Q8WV44 630 aa30.79■■■□□ 2.52
SFTPD-201ENST00000372292 GAPVD1Q14C86 1478 aa30.78■■■□□ 2.52
SFTPD-201ENST00000372292 GRIN2BQ13224 1484 aa30.76■■■□□ 2.51
SFTPD-201ENST00000372292 OSCARQ8IYS5 282 aa30.73■■■□□ 2.51
SFTPD-201ENST00000372292 DNAJC5Q9H3Z4 198 aa30.7■■■□□ 2.51
SFTPD-201ENST00000372292 FBLN2P98095 1184 aa30.67■■■□□ 2.5
SFTPD-201ENST00000372292 MAGI1Q96QZ7 1491 aaPredicted RBP30.64■■■□□ 2.5
SFTPD-201ENST00000372292 CHMP7Q8WUX9 453 aaPredicted RBP30.64■■■□□ 2.5
SFTPD-201ENST00000372292 ABCA5Q8WWZ7 1642 aa30.64■■■□□ 2.5
SFTPD-201ENST00000372292 KIF27Q86VH2 1401 aa30.62■■■□□ 2.49
SFTPD-201ENST00000372292 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
SFTPD-201ENST00000372292 PBRM1Q86U86 1689 aa30.57■■■□□ 2.48
SFTPD-201ENST00000372292 ERICH3Q5RHP9 1530 aa30.53■■■□□ 2.48
SFTPD-201ENST00000372292 SYNJ2O15056 1496 aa30.51■■■□□ 2.48
SFTPD-201ENST00000372292 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.46
SFTPD-201ENST00000372292 CHD1O14646 1710 aa30.42■■■□□ 2.46
SFTPD-201ENST00000372292 IGF1RP08069 1367 aa30.41■■■□□ 2.46
SFTPD-201ENST00000372292 CHIC1Q5VXU3 224 aa30.39■■■□□ 2.46
SFTPD-201ENST00000372292 ADAMTS12P58397 1594 aa30.34■■■□□ 2.45
SFTPD-201ENST00000372292 GRIN2AQ12879 1464 aa30.3■■■□□ 2.44
SFTPD-201ENST00000372292 CARMIL1Q5VZK9 1371 aa30.28■■■□□ 2.44
SFTPD-201ENST00000372292 CUL7Q14999 1698 aa30.28■■■□□ 2.44
SFTPD-201ENST00000372292 EEA1Q15075 1411 aa30.21■■■□□ 2.43
SFTPD-201ENST00000372292 RUSC2Q8N2Y8 1516 aa30.19■■■□□ 2.42
SFTPD-201ENST00000372292 CSRNP3Q8WYN3 585 aa30.15■■■□□ 2.42
SFTPD-201ENST00000372292 NUP160Q12769 1436 aa30.14■■■□□ 2.42
SFTPD-201ENST00000372292 RAPGEF2Q9Y4G8 1499 aa30.1■■■□□ 2.41
SFTPD-201ENST00000372292 CLASP1Q7Z460 1538 aa30.1■■■□□ 2.41
SFTPD-201ENST00000372292 CEP170Q5SW79 1584 aa30.05■■■□□ 2.4
SFTPD-201ENST00000372292 FAM9AQ8IZU1 332 aaPredicted RBP30.03■■■□□ 2.4
SFTPD-201ENST00000372292 JPH4Q96JJ6 628 aa30■■■□□ 2.39
SFTPD-201ENST00000372292 ARHGEF11O15085 1522 aa30■■■□□ 2.39
SFTPD-201ENST00000372292 KIAA0586Q9BVV6 1533 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms