Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 AL121672.3-201ENST00000608644 468 ntBASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 AC006333.2-201ENST00000607957 2099 ntBASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AC116562.4-201ENST00000641316 2276 ntBASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 TSSC2-201ENST00000450217 709 ntBASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AC104390.1-201ENST00000555663 520 ntBASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AC092329.2-201ENST00000598402 547 ntBASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 AC034236.2-201ENST00000606662 1610 ntBASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNAP47Q5SQN1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 HTR7P1-202ENST00000624664 4411 ntBASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 ATP5G2P1-201ENST00000433580 426 ntBASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SNAP47Q5SQN1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAP47Q5SQN1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms