RNA–Protein interactions for RNA: ENST00000559843.1

AL161669.1-201, humanhuman

TSL 3 BASIC

Gene AL161669.1, Length 386 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL161669.1-201ENST00000559843 NISCHQ9Y2I1 1504 aa44.55■■■■■ 4.72
AL161669.1-201ENST00000559843 CCDC180Q9P1Z9 1646 aa39.91■■■■□ 3.98
AL161669.1-201ENST00000559843 ABCC9O60706 1549 aa39.29■■■■□ 3.88
AL161669.1-201ENST00000559843 RB1CC1Q8TDY2 1594 aa37.72■■■■□ 3.63
AL161669.1-201ENST00000559843 NACADO15069 1562 aa37.55■■■■□ 3.6
AL161669.1-201ENST00000559843 DCAF8L2P0C7V8 631 aa37.41■■■■□ 3.58
AL161669.1-201ENST00000559843 MYO15BQ96JP2 1530 aa37.16■■■■□ 3.54
AL161669.1-201ENST00000559843 ZCCHC6Q5VYS8 1495 aaKnown RBP37.03■■■■□ 3.52
AL161669.1-201ENST00000559843 UNC13AQ9UPW8 1703 aa36.88■■■■□ 3.49
AL161669.1-201ENST00000559843 DCAF1Q9Y4B6 1507 aa36.86■■■■□ 3.49
AL161669.1-201ENST00000559843 PABPN1Q86U42 306 aaKnown RBP eCLIP36.58■■■■□ 3.45
AL161669.1-201ENST00000559843 BICRAQ9NZM4 1560 aa36.46■■■■□ 3.43
AL161669.1-201ENST00000559843 SCRIBQ14160 1630 aa36.32■■■■□ 3.4
AL161669.1-201ENST00000559843 DNAJC5BQ9UF47 199 aa36.23■■■■□ 3.39
AL161669.1-201ENST00000559843 SHROOM4Q9ULL8 1493 aa36.17■■■■□ 3.38
AL161669.1-201ENST00000559843 EIF4G1Q04637 1599 aaKnown RBP35.6■■■■□ 3.29
AL161669.1-201ENST00000559843 CC2D2AQ9P2K1 1620 aa35.56■■■■□ 3.28
AL161669.1-201ENST00000559843 CECR2Q9BXF3 1484 aa35.35■■■■□ 3.25
AL161669.1-201ENST00000559843 SMARCA4P51532 1647 aa34.7■■■■□ 3.14
AL161669.1-201ENST00000559843 BAZ1AQ9NRL2 1556 aaPredicted RBP34.62■■■■□ 3.13
AL161669.1-201ENST00000559843 SMARCA2P51531 1590 aa34.57■■■■□ 3.13
AL161669.1-201ENST00000559843 NCAPD3P42695 1498 aa34.57■■■■□ 3.12
AL161669.1-201ENST00000559843 ATAD2BQ9ULI0 1458 aa34.53■■■■□ 3.12
AL161669.1-201ENST00000559843 HMGXB3Q12766 1538 aa34.45■■■■□ 3.1
AL161669.1-201ENST00000559843 PEG3Q9GZU2 1588 aa34.33■■■■□ 3.09
AL161669.1-201ENST00000559843 BAZ1BQ9UIG0 1483 aaKnown RBP34.31■■■■□ 3.08
AL161669.1-201ENST00000559843 MROH2BQ7Z745 1585 aa34.29■■■■□ 3.08
AL161669.1-201ENST00000559843 ERCC6Q03468 1493 aa33.98■■■■□ 3.03
AL161669.1-201ENST00000559843 WIZO95785 1651 aa33.97■■■■□ 3.03
AL161669.1-201ENST00000559843 NESP48681 1621 aa33.84■■■■□ 3.01
AL161669.1-201ENST00000559843 LAMC3Q9Y6N6 1575 aa33.83■■■■□ 3.01
AL161669.1-201ENST00000559843 RSF1Q96T23 1441 aaPredicted RBP33.74■■■□□ 2.99
AL161669.1-201ENST00000559843 CUX2O14529 1486 aa33.73■■■□□ 2.99
AL161669.1-201ENST00000559843 TOP2AP11388 1531 aaKnown RBP33.59■■■□□ 2.97
AL161669.1-201ENST00000559843 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
AL161669.1-201ENST00000559843 KIF21AQ7Z4S6 1674 aa33.57■■■□□ 2.96
AL161669.1-201ENST00000559843 CADPSQ9ULU8 1353 aa33.56■■■□□ 2.96
AL161669.1-201ENST00000559843 THOC2Q8NI27 1593 aaKnown RBP33.5■■■□□ 2.95
AL161669.1-201ENST00000559843 CFTRP13569 1480 aa33.27■■■□□ 2.92
AL161669.1-201ENST00000559843 MRC2Q9UBG0 1479 aa33.25■■■□□ 2.91
AL161669.1-201ENST00000559843 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
AL161669.1-201ENST00000559843 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
AL161669.1-201ENST00000559843 FANCD2Q9BXW9 1451 aa33.2■■■□□ 2.91
AL161669.1-201ENST00000559843 WDR62O43379 1518 aa33.14■■■□□ 2.9
AL161669.1-201ENST00000559843 CCDC88BA6NC98 1476 aa33.13■■■□□ 2.89
AL161669.1-201ENST00000559843 DNAJC5Q9H3Z4 198 aa33.04■■■□□ 2.88
AL161669.1-201ENST00000559843 URB2Q14146 1524 aaKnown RBP32.85■■■□□ 2.85
AL161669.1-201ENST00000559843 ABCC8Q09428 1581 aa32.67■■■□□ 2.82
AL161669.1-201ENST00000559843 SUPT5HO00267 1087 aaKnown RBP32.65■■■□□ 2.82
AL161669.1-201ENST00000559843 TOPBP1Q92547 1522 aa32.62■■■□□ 2.81
AL161669.1-201ENST00000559843 DNMBPQ6XZF7 1577 aa32.6■■■□□ 2.81
AL161669.1-201ENST00000559843 IFT140Q96RY7 1462 aa32.54■■■□□ 2.8
AL161669.1-201ENST00000559843 ZNF608Q9ULD9 1512 aaPredicted RBP32.35■■■□□ 2.77
AL161669.1-201ENST00000559843 EIF4G3O43432 1585 aaKnown RBP32.31■■■□□ 2.76
AL161669.1-201ENST00000559843 POLA1P09884 1462 aaPredicted RBP32.3■■■□□ 2.76
AL161669.1-201ENST00000559843 TARBP1Q13395 1621 aaKnown RBP32.29■■■□□ 2.76
AL161669.1-201ENST00000559843 OSCARQ8IYS5 282 aa32.23■■■□□ 2.75
AL161669.1-201ENST00000559843 CUX1P39880 1505 aa32.21■■■□□ 2.75
AL161669.1-201ENST00000559843 FGD5Q6ZNL6 1462 aa32.2■■■□□ 2.75
AL161669.1-201ENST00000559843 SOGA1O94964 1423 aa32.17■■■□□ 2.74
AL161669.1-201ENST00000559843 RAD54L2Q9Y4B4 1467 aa32.15■■■□□ 2.74
AL161669.1-201ENST00000559843 WDR97A6NE52 1622 aa32.13■■■□□ 2.73
AL161669.1-201ENST00000559843 AQRO60306 1485 aaKnown RBP eCLIP32.13■■■□□ 2.73
AL161669.1-201ENST00000559843 CHD1O14646 1710 aa32.03■■■□□ 2.72
AL161669.1-201ENST00000559843 TDRD9Q8NDG6 1382 aaKnown RBP32■■■□□ 2.71
AL161669.1-201ENST00000559843 BIVM-ERCC5R4GMW8 1640 aa31.93■■■□□ 2.7
AL161669.1-201ENST00000559843 WRNQ14191 1432 aaPredicted RBP eCLIP31.9■■■□□ 2.7
AL161669.1-201ENST00000559843 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
AL161669.1-201ENST00000559843 FBLN2P98095 1184 aa31.89■■■□□ 2.7
AL161669.1-201ENST00000559843 PBRM1Q86U86 1689 aa31.89■■■□□ 2.7
AL161669.1-201ENST00000559843 GRIN2BQ13224 1484 aa31.88■■■□□ 2.69
AL161669.1-201ENST00000559843 SNAPC4Q5SXM2 1469 aa31.87■■■□□ 2.69
AL161669.1-201ENST00000559843 ABCA10Q8WWZ4 1543 aa31.86■■■□□ 2.69
AL161669.1-201ENST00000559843 TRIM41Q8WV44 630 aa31.86■■■□□ 2.69
AL161669.1-201ENST00000559843 MAGI1Q96QZ7 1491 aaPredicted RBP31.85■■■□□ 2.69
AL161669.1-201ENST00000559843 SYNJ1O43426 1573 aa31.82■■■□□ 2.68
AL161669.1-201ENST00000559843 GAPVD1Q14C86 1478 aa31.82■■■□□ 2.68
AL161669.1-201ENST00000559843 RIMBP3CA6NJZ7 1639 aa31.79■■■□□ 2.68
AL161669.1-201ENST00000559843 RIMBP3BA6NNM3 1639 aa31.79■■■□□ 2.68
AL161669.1-201ENST00000559843 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
AL161669.1-201ENST00000559843 RIMBP3Q9UFD9 1639 aa31.79■■■□□ 2.68
AL161669.1-201ENST00000559843 CHMP7Q8WUX9 453 aaPredicted RBP31.74■■■□□ 2.67
AL161669.1-201ENST00000559843 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
AL161669.1-201ENST00000559843 ARHGEF11O15085 1522 aa31.71■■■□□ 2.67
AL161669.1-201ENST00000559843 CLASP1Q7Z460 1538 aa31.57■■■□□ 2.64
AL161669.1-201ENST00000559843 ADAMTS12P58397 1594 aa31.54■■■□□ 2.64
AL161669.1-201ENST00000559843 ERICH3Q5RHP9 1530 aa31.51■■■□□ 2.63
AL161669.1-201ENST00000559843 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
AL161669.1-201ENST00000559843 FHAD1B1AJZ9 1412 aa31.44■■■□□ 2.62
AL161669.1-201ENST00000559843 CYB5RLQ6IPT4 315 aa31.41■■■□□ 2.62
AL161669.1-201ENST00000559843 ARAP1Q96P48 1450 aa31.4■■■□□ 2.62
AL161669.1-201ENST00000559843 CEP170Q5SW79 1584 aa31.3■■■□□ 2.6
AL161669.1-201ENST00000559843 NUP160Q12769 1436 aa31.3■■■□□ 2.6
AL161669.1-201ENST00000559843 KIF27Q86VH2 1401 aa31.29■■■□□ 2.6
AL161669.1-201ENST00000559843 CUL7Q14999 1698 aa31.22■■■□□ 2.59
AL161669.1-201ENST00000559843 SHROOM2Q13796 1616 aa31.16■■■□□ 2.58
AL161669.1-201ENST00000559843 IGF1RP08069 1367 aa31.09■■■□□ 2.57
AL161669.1-201ENST00000559843 RUSC2Q8N2Y8 1516 aa31.08■■■□□ 2.57
AL161669.1-201ENST00000559843 ERCC6L2Q5T890 1561 aa31.05■■■□□ 2.56
AL161669.1-201ENST00000559843 TRHP20396 242 aaPredicted RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 220 ms