RNA–Protein interactions for RNA: ENST00000372728.3

BEX1-201, Transcript of brain expressed X-linked 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEX1, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEX1-201ENST00000372728 NISCHQ9Y2I1 1504 aa44.98■■■■■ 4.79
BEX1-201ENST00000372728 CCDC180Q9P1Z9 1646 aa40.14■■■■■ 4.02
BEX1-201ENST00000372728 ABCC9O60706 1549 aa39.22■■■■□ 3.87
BEX1-201ENST00000372728 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.63
BEX1-201ENST00000372728 NACADO15069 1562 aa37.7■■■■□ 3.63
BEX1-201ENST00000372728 ZCCHC6Q5VYS8 1495 aaKnown RBP37.5■■■■□ 3.59
BEX1-201ENST00000372728 MYO15BQ96JP2 1530 aa37.5■■■■□ 3.59
BEX1-201ENST00000372728 DCAF8L2P0C7V8 631 aa37.35■■■■□ 3.57
BEX1-201ENST00000372728 DCAF1Q9Y4B6 1507 aa37.29■■■■□ 3.56
BEX1-201ENST00000372728 UNC13AQ9UPW8 1703 aa36.96■■■■□ 3.51
BEX1-201ENST00000372728 BICRAQ9NZM4 1560 aa36.66■■■■□ 3.46
BEX1-201ENST00000372728 PABPN1Q86U42 306 aaKnown RBP eCLIP36.54■■■■□ 3.44
BEX1-201ENST00000372728 SCRIBQ14160 1630 aa36.52■■■■□ 3.44
BEX1-201ENST00000372728 SHROOM4Q9ULL8 1493 aa36.32■■■■□ 3.41
BEX1-201ENST00000372728 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
BEX1-201ENST00000372728 EIF4G1Q04637 1599 aaKnown RBP35.68■■■■□ 3.3
BEX1-201ENST00000372728 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
BEX1-201ENST00000372728 CECR2Q9BXF3 1484 aa35.28■■■■□ 3.24
BEX1-201ENST00000372728 SMARCA4P51532 1647 aa34.96■■■■□ 3.19
BEX1-201ENST00000372728 BAZ1AQ9NRL2 1556 aaPredicted RBP34.88■■■■□ 3.17
BEX1-201ENST00000372728 NCAPD3P42695 1498 aa34.77■■■■□ 3.16
BEX1-201ENST00000372728 ATAD2BQ9ULI0 1458 aa34.76■■■■□ 3.15
BEX1-201ENST00000372728 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
BEX1-201ENST00000372728 PEG3Q9GZU2 1588 aa34.67■■■■□ 3.14
BEX1-201ENST00000372728 MROH2BQ7Z745 1585 aa34.65■■■■□ 3.14
BEX1-201ENST00000372728 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
BEX1-201ENST00000372728 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
BEX1-201ENST00000372728 WIZO95785 1651 aa34.27■■■■□ 3.08
BEX1-201ENST00000372728 RSF1Q96T23 1441 aaPredicted RBP34.2■■■■□ 3.06
BEX1-201ENST00000372728 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
BEX1-201ENST00000372728 NESP48681 1621 aa33.93■■■■□ 3.02
BEX1-201ENST00000372728 LAMC3Q9Y6N6 1575 aa33.89■■■■□ 3.02
BEX1-201ENST00000372728 ERCC6Q03468 1493 aa33.81■■■■□ 3
BEX1-201ENST00000372728 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.98
BEX1-201ENST00000372728 KIF21AQ7Z4S6 1674 aa33.6■■■□□ 2.97
BEX1-201ENST00000372728 PDS5BQ9NTI5 1447 aa33.6■■■□□ 2.97
BEX1-201ENST00000372728 CUX2O14529 1486 aa33.58■■■□□ 2.97
BEX1-201ENST00000372728 THOC2Q8NI27 1593 aaKnown RBP33.55■■■□□ 2.96
BEX1-201ENST00000372728 CFTRP13569 1480 aa33.53■■■□□ 2.96
BEX1-201ENST00000372728 CCDC88BA6NC98 1476 aa33.48■■■□□ 2.95
BEX1-201ENST00000372728 PRDM2Q13029 1718 aa33.36■■■□□ 2.93
BEX1-201ENST00000372728 FANCD2Q9BXW9 1451 aa33.33■■■□□ 2.93
BEX1-201ENST00000372728 CEP164Q9UPV0 1460 aa33.31■■■□□ 2.92
BEX1-201ENST00000372728 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
BEX1-201ENST00000372728 WDR62O43379 1518 aa33.25■■■□□ 2.91
BEX1-201ENST00000372728 SUPT5HO00267 1087 aaKnown RBP33.05■■■□□ 2.88
BEX1-201ENST00000372728 URB2Q14146 1524 aaKnown RBP33.03■■■□□ 2.88
BEX1-201ENST00000372728 TOPBP1Q92547 1522 aa32.81■■■□□ 2.84
BEX1-201ENST00000372728 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
BEX1-201ENST00000372728 ABCC8Q09428 1581 aa32.79■■■□□ 2.84
BEX1-201ENST00000372728 IFT140Q96RY7 1462 aa32.63■■■□□ 2.81
BEX1-201ENST00000372728 DNAJC5Q9H3Z4 198 aa32.56■■■□□ 2.8
BEX1-201ENST00000372728 POLA1P09884 1462 aaPredicted RBP32.53■■■□□ 2.8
BEX1-201ENST00000372728 CUX1P39880 1505 aa32.52■■■□□ 2.8
BEX1-201ENST00000372728 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.79
BEX1-201ENST00000372728 ZNF608Q9ULD9 1512 aaPredicted RBP32.47■■■□□ 2.79
BEX1-201ENST00000372728 FGD5Q6ZNL6 1462 aa32.42■■■□□ 2.78
BEX1-201ENST00000372728 EIF4G3O43432 1585 aaKnown RBP32.41■■■□□ 2.78
BEX1-201ENST00000372728 RAD54L2Q9Y4B4 1467 aa32.33■■■□□ 2.77
BEX1-201ENST00000372728 SOGA1O94964 1423 aa32.31■■■□□ 2.76
BEX1-201ENST00000372728 WDR97A6NE52 1622 aa32.29■■■□□ 2.76
BEX1-201ENST00000372728 BIVM-ERCC5R4GMW8 1640 aa32.27■■■□□ 2.76
BEX1-201ENST00000372728 TOP2BQ02880 1626 aa32.24■■■□□ 2.75
BEX1-201ENST00000372728 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.75
BEX1-201ENST00000372728 WRNQ14191 1432 aaPredicted RBP eCLIP32.23■■■□□ 2.75
BEX1-201ENST00000372728 SYNJ1O43426 1573 aa32.22■■■□□ 2.75
BEX1-201ENST00000372728 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
BEX1-201ENST00000372728 ABCA10Q8WWZ4 1543 aa32.13■■■□□ 2.73
BEX1-201ENST00000372728 ABCA5Q8WWZ7 1642 aa32.06■■■□□ 2.72
BEX1-201ENST00000372728 CHD1O14646 1710 aa32.01■■■□□ 2.72
BEX1-201ENST00000372728 OSCARQ8IYS5 282 aa32.01■■■□□ 2.71
BEX1-201ENST00000372728 PBRM1Q86U86 1689 aa32■■■□□ 2.71
BEX1-201ENST00000372728 GRIN2BQ13224 1484 aa32■■■□□ 2.71
BEX1-201ENST00000372728 GAPVD1Q14C86 1478 aa31.98■■■□□ 2.71
BEX1-201ENST00000372728 SNAPC4Q5SXM2 1469 aa31.98■■■□□ 2.71
BEX1-201ENST00000372728 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
BEX1-201ENST00000372728 SYNJ2O15056 1496 aa31.83■■■□□ 2.69
BEX1-201ENST00000372728 ADAMTS12P58397 1594 aa31.75■■■□□ 2.67
BEX1-201ENST00000372728 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
BEX1-201ENST00000372728 FBLN2P98095 1184 aa31.74■■■□□ 2.67
BEX1-201ENST00000372728 CHMP7Q8WUX9 453 aaPredicted RBP31.69■■■□□ 2.66
BEX1-201ENST00000372728 CLASP1Q7Z460 1538 aa31.68■■■□□ 2.66
BEX1-201ENST00000372728 RIMBP3CA6NJZ7 1639 aa31.65■■■□□ 2.66
BEX1-201ENST00000372728 RIMBP3BA6NNM3 1639 aa31.65■■■□□ 2.66
BEX1-201ENST00000372728 RIMBP3Q9UFD9 1639 aa31.65■■■□□ 2.66
BEX1-201ENST00000372728 ARHGEF11O15085 1522 aa31.63■■■□□ 2.65
BEX1-201ENST00000372728 FHAD1B1AJZ9 1412 aa31.62■■■□□ 2.65
BEX1-201ENST00000372728 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
BEX1-201ENST00000372728 KIF27Q86VH2 1401 aa31.56■■■□□ 2.64
BEX1-201ENST00000372728 NUP160Q12769 1436 aa31.5■■■□□ 2.63
BEX1-201ENST00000372728 CEP170Q5SW79 1584 aa31.48■■■□□ 2.63
BEX1-201ENST00000372728 CUL7Q14999 1698 aa31.46■■■□□ 2.63
BEX1-201ENST00000372728 IGF1RP08069 1367 aa31.43■■■□□ 2.62
BEX1-201ENST00000372728 ARAP1Q96P48 1450 aa31.37■■■□□ 2.61
BEX1-201ENST00000372728 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
BEX1-201ENST00000372728 SHROOM2Q13796 1616 aa31.32■■■□□ 2.6
BEX1-201ENST00000372728 RUSC2Q8N2Y8 1516 aa31.29■■■□□ 2.6
BEX1-201ENST00000372728 CARMIL1Q5VZK9 1371 aa31.22■■■□□ 2.59
BEX1-201ENST00000372728 ERCC6L2Q5T890 1561 aa31.18■■■□□ 2.58
BEX1-201ENST00000372728 CYB5RLQ6IPT4 315 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms