RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 NISCHQ9Y2I1 1504 aa45.74■■■■■ 4.91
RAP1B-228ENST00000542145 ABCC9O60706 1549 aa41.82■■■■■ 4.29
RAP1B-228ENST00000542145 CCDC180Q9P1Z9 1646 aa41.27■■■■■ 4.2
RAP1B-228ENST00000542145 DNAJC5BQ9UF47 199 aa39.78■■■■□ 3.96
RAP1B-228ENST00000542145 RB1CC1Q8TDY2 1594 aa39.54■■■■□ 3.92
RAP1B-228ENST00000542145 NACADO15069 1562 aa39.13■■■■□ 3.85
RAP1B-228ENST00000542145 DCAF8L2P0C7V8 631 aa38.88■■■■□ 3.81
RAP1B-228ENST00000542145 PABPN1Q86U42 306 aaKnown RBP eCLIP38.87■■■■□ 3.81
RAP1B-228ENST00000542145 UNC13AQ9UPW8 1703 aa38.77■■■■□ 3.8
RAP1B-228ENST00000542145 BICRAQ9NZM4 1560 aa38.47■■■■□ 3.75
RAP1B-228ENST00000542145 MYO15BQ96JP2 1530 aa38.39■■■■□ 3.74
RAP1B-228ENST00000542145 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
RAP1B-228ENST00000542145 SHROOM4Q9ULL8 1493 aa37.77■■■■□ 3.64
RAP1B-228ENST00000542145 CC2D2AQ9P2K1 1620 aa37.76■■■■□ 3.63
RAP1B-228ENST00000542145 DCAF1Q9Y4B6 1507 aa37.71■■■■□ 3.63
RAP1B-228ENST00000542145 CECR2Q9BXF3 1484 aa37.71■■■■□ 3.63
RAP1B-228ENST00000542145 SCRIBQ14160 1630 aa37.59■■■■□ 3.61
RAP1B-228ENST00000542145 EIF4G1Q04637 1599 aaKnown RBP37.52■■■■□ 3.6
RAP1B-228ENST00000542145 DNAJC5Q9H3Z4 198 aa36.87■■■■□ 3.49
RAP1B-228ENST00000542145 CUX2O14529 1486 aa36.21■■■■□ 3.39
RAP1B-228ENST00000542145 NCAPD3P42695 1498 aa36.15■■■■□ 3.38
RAP1B-228ENST00000542145 ERCC6Q03468 1493 aa36.1■■■■□ 3.37
RAP1B-228ENST00000542145 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
RAP1B-228ENST00000542145 HMGXB3Q12766 1538 aa35.81■■■■□ 3.32
RAP1B-228ENST00000542145 SMARCA2P51531 1590 aa35.81■■■■□ 3.32
RAP1B-228ENST00000542145 NESP48681 1621 aa35.8■■■■□ 3.32
RAP1B-228ENST00000542145 SMARCA4P51532 1647 aa35.8■■■■□ 3.32
RAP1B-228ENST00000542145 BAZ1BQ9UIG0 1483 aaKnown RBP35.57■■■■□ 3.28
RAP1B-228ENST00000542145 THOC2Q8NI27 1593 aaKnown RBP35.51■■■■□ 3.28
RAP1B-228ENST00000542145 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.28
RAP1B-228ENST00000542145 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
RAP1B-228ENST00000542145 LAMC3Q9Y6N6 1575 aa35.41■■■■□ 3.26
RAP1B-228ENST00000542145 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
RAP1B-228ENST00000542145 MROH2BQ7Z745 1585 aa35.26■■■■□ 3.24
RAP1B-228ENST00000542145 PDS5BQ9NTI5 1447 aa35.2■■■■□ 3.23
RAP1B-228ENST00000542145 TRIM41Q8WV44 630 aa35.03■■■■□ 3.2
RAP1B-228ENST00000542145 CADPSQ9ULU8 1353 aa35.01■■■■□ 3.2
RAP1B-228ENST00000542145 MRC2Q9UBG0 1479 aa34.94■■■■□ 3.18
RAP1B-228ENST00000542145 WDR62O43379 1518 aa34.88■■■■□ 3.17
RAP1B-228ENST00000542145 WIZO95785 1651 aa34.85■■■■□ 3.17
RAP1B-228ENST00000542145 CEP164Q9UPV0 1460 aa34.69■■■■□ 3.14
RAP1B-228ENST00000542145 FANCD2Q9BXW9 1451 aa34.63■■■■□ 3.13
RAP1B-228ENST00000542145 OSCARQ8IYS5 282 aa34.51■■■■□ 3.12
RAP1B-228ENST00000542145 CFTRP13569 1480 aa34.51■■■■□ 3.11
RAP1B-228ENST00000542145 URB2Q14146 1524 aaKnown RBP34.4■■■■□ 3.1
RAP1B-228ENST00000542145 RSF1Q96T23 1441 aaPredicted RBP34.32■■■■□ 3.08
RAP1B-228ENST00000542145 TOP2AP11388 1531 aaKnown RBP34.3■■■■□ 3.08
RAP1B-228ENST00000542145 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
RAP1B-228ENST00000542145 RIMBP3CA6NJZ7 1639 aa34.15■■■■□ 3.06
RAP1B-228ENST00000542145 RIMBP3BA6NNM3 1639 aa34.15■■■■□ 3.06
RAP1B-228ENST00000542145 RIMBP3Q9UFD9 1639 aa34.15■■■■□ 3.06
RAP1B-228ENST00000542145 ZNF608Q9ULD9 1512 aaPredicted RBP34.07■■■■□ 3.04
RAP1B-228ENST00000542145 IFT140Q96RY7 1462 aa34.01■■■■□ 3.04
RAP1B-228ENST00000542145 CCDC88BA6NC98 1476 aa33.95■■■■□ 3.03
RAP1B-228ENST00000542145 ARHGEF11O15085 1522 aa33.95■■■■□ 3.03
RAP1B-228ENST00000542145 TOPBP1Q92547 1522 aa33.93■■■■□ 3.02
RAP1B-228ENST00000542145 EIF4G3O43432 1585 aaKnown RBP33.83■■■■□ 3.01
RAP1B-228ENST00000542145 ABCC8Q09428 1581 aa33.77■■■■□ 3
RAP1B-228ENST00000542145 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
RAP1B-228ENST00000542145 CHD1O14646 1710 aa33.74■■■□□ 2.99
RAP1B-228ENST00000542145 DNMBPQ6XZF7 1577 aa33.73■■■□□ 2.99
RAP1B-228ENST00000542145 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.981e-6■■■■□ 26.1
RAP1B-228ENST00000542145 TARBP1Q13395 1621 aaKnown RBP33.68■■■□□ 2.98
RAP1B-228ENST00000542145 ARAP1Q96P48 1450 aa33.59■■■□□ 2.97
RAP1B-228ENST00000542145 FBLN2P98095 1184 aa33.57■■■□□ 2.96
RAP1B-228ENST00000542145 TRHP20396 242 aaPredicted RBP33.54■■■□□ 2.96
RAP1B-228ENST00000542145 POLA1P09884 1462 aaPredicted RBP33.53■■■□□ 2.96
RAP1B-228ENST00000542145 RAD54L2Q9Y4B4 1467 aa33.45■■■□□ 2.95
RAP1B-228ENST00000542145 TDRD9Q8NDG6 1382 aaKnown RBP33.4■■■□□ 2.94
RAP1B-228ENST00000542145 SOGA1O94964 1423 aa33.38■■■□□ 2.93
RAP1B-228ENST00000542145 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
RAP1B-228ENST00000542145 CLASP1Q7Z460 1538 aa33.28■■■□□ 2.92
RAP1B-228ENST00000542145 FGD5Q6ZNL6 1462 aa33.25■■■□□ 2.91
RAP1B-228ENST00000542145 WDR97A6NE52 1622 aa33.23■■■□□ 2.91
RAP1B-228ENST00000542145 CHMP7Q8WUX9 453 aaPredicted RBP33.22■■■□□ 2.91
RAP1B-228ENST00000542145 SYNJ1O43426 1573 aa33.19■■■□□ 2.9
RAP1B-228ENST00000542145 MAGI1Q96QZ7 1491 aaPredicted RBP33.17■■■□□ 2.9
RAP1B-228ENST00000542145 CUX1P39880 1505 aa33.15■■■□□ 2.9
RAP1B-228ENST00000542145 GRIN2BQ13224 1484 aa33.12■■■□□ 2.89
RAP1B-228ENST00000542145 SYNJ2O15056 1496 aa33.08■■■□□ 2.89
RAP1B-228ENST00000542145 PBRM1Q86U86 1689 aa33.01■■■□□ 2.88
RAP1B-228ENST00000542145 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
RAP1B-228ENST00000542145 AEBP2Q6ZN18 517 aaPredicted RBP32.94■■■□□ 2.86
RAP1B-228ENST00000542145 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
RAP1B-228ENST00000542145 ABCA10Q8WWZ4 1543 aa32.83■■■□□ 2.85
RAP1B-228ENST00000542145 ERCC6L2Q5T890 1561 aa32.78■■■□□ 2.84
RAP1B-228ENST00000542145 GRIN2AQ12879 1464 aa32.71■■■□□ 2.83
RAP1B-228ENST00000542145 CEP170Q5SW79 1584 aa32.65■■■□□ 2.82
RAP1B-228ENST00000542145 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
RAP1B-228ENST00000542145 NUP160Q12769 1436 aa32.61■■■□□ 2.81
RAP1B-228ENST00000542145 WRNQ14191 1432 aaPredicted RBP eCLIP32.59■■■□□ 2.81
RAP1B-228ENST00000542145 SHROOM2Q13796 1616 aa32.56■■■□□ 2.8
RAP1B-228ENST00000542145 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
RAP1B-228ENST00000542145 KIF13AQ9H1H9 1805 aa32.49■■■□□ 2.79
RAP1B-228ENST00000542145 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
RAP1B-228ENST00000542145 TOP2BQ02880 1626 aa32.46■■■□□ 2.79
RAP1B-228ENST00000542145 SUPT5HO00267 1087 aaKnown RBP32.43■■■□□ 2.78
RAP1B-228ENST00000542145 ERICH3Q5RHP9 1530 aa32.4■■■□□ 2.78
RAP1B-228ENST00000542145 PRG4Q92954 1404 aaPredicted RBP32.36■■■□□ 2.77
RAP1B-228ENST00000542145 JPH4Q96JJ6 628 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms