Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COMMD3-BMI1R4GMX3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
COMMD3-BMI1R4GMX3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
COMMD3-BMI1R4GMX3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
COMMD3-BMI1R4GMX3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
COMMD3-BMI1R4GMX3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.23■■□□□ 1.31
COMMD3-BMI1R4GMX3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.23■■□□□ 1.31
COMMD3-BMI1R4GMX3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COMMD3-BMI1R4GMX3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COMMD3-BMI1R4GMX3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COMMD3-BMI1R4GMX3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COMMD3-BMI1R4GMX3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.21■■□□□ 1.31
COMMD3-BMI1R4GMX3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COMMD3-BMI1R4GMX3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COMMD3-BMI1R4GMX3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
COMMD3-BMI1R4GMX3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COMMD3-BMI1R4GMX3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COMMD3-BMI1R4GMX3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COMMD3-BMI1R4GMX3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COMMD3-BMI1R4GMX3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.19■■□□□ 1.3
COMMD3-BMI1R4GMX3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 AC079834.2-201ENST00000609776 1949 ntBASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 AL391121.1-201ENST00000607967 1349 ntBASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.18■■□□□ 1.3
COMMD3-BMI1R4GMX3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.17■■□□□ 1.3
COMMD3-BMI1R4GMX3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COMMD3-BMI1R4GMX3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
COMMD3-BMI1R4GMX3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COMMD3-BMI1R4GMX3 CLDN5-201ENST00000403084 2357 ntBASIC23.16■■□□□ 1.3
COMMD3-BMI1R4GMX3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.16■■□□□ 1.3
COMMD3-BMI1R4GMX3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.16■■□□□ 1.3
COMMD3-BMI1R4GMX3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COMMD3-BMI1R4GMX3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.15■■□□□ 1.3
COMMD3-BMI1R4GMX3 AC136428.2-201ENST00000563187 214 ntBASIC23.15■■□□□ 1.3
COMMD3-BMI1R4GMX3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COMMD3-BMI1R4GMX3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COMMD3-BMI1R4GMX3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COMMD3-BMI1R4GMX3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COMMD3-BMI1R4GMX3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COMMD3-BMI1R4GMX3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COMMD3-BMI1R4GMX3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COMMD3-BMI1R4GMX3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.12■■□□□ 1.29
COMMD3-BMI1R4GMX3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COMMD3-BMI1R4GMX3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COMMD3-BMI1R4GMX3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
COMMD3-BMI1R4GMX3 CAHM-201ENST00000604200 896 ntBASIC23.12■■□□□ 1.29
COMMD3-BMI1R4GMX3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COMMD3-BMI1R4GMX3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
COMMD3-BMI1R4GMX3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.11■■□□□ 1.29
COMMD3-BMI1R4GMX3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.11■■□□□ 1.29
COMMD3-BMI1R4GMX3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.11■■□□□ 1.29
COMMD3-BMI1R4GMX3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
COMMD3-BMI1R4GMX3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COMMD3-BMI1R4GMX3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
COMMD3-BMI1R4GMX3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD3-BMI1R4GMX3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
COMMD3-BMI1R4GMX3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.1■■□□□ 1.29
COMMD3-BMI1R4GMX3 AC097358.2-201ENST00000607541 1159 ntBASIC23.1■■□□□ 1.29
COMMD3-BMI1R4GMX3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD3-BMI1R4GMX3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.1■■□□□ 1.29
COMMD3-BMI1R4GMX3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COMMD3-BMI1R4GMX3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
COMMD3-BMI1R4GMX3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
COMMD3-BMI1R4GMX3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
COMMD3-BMI1R4GMX3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
COMMD3-BMI1R4GMX3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.09■■□□□ 1.29
COMMD3-BMI1R4GMX3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.09■■□□□ 1.29
COMMD3-BMI1R4GMX3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COMMD3-BMI1R4GMX3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COMMD3-BMI1R4GMX3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COMMD3-BMI1R4GMX3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COMMD3-BMI1R4GMX3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.07■■□□□ 1.28
COMMD3-BMI1R4GMX3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COMMD3-BMI1R4GMX3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.07■■□□□ 1.28
COMMD3-BMI1R4GMX3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COMMD3-BMI1R4GMX3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.06■■□□□ 1.28
COMMD3-BMI1R4GMX3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.06■■□□□ 1.28
COMMD3-BMI1R4GMX3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COMMD3-BMI1R4GMX3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
COMMD3-BMI1R4GMX3 DUSP8P4-201ENST00000399538 1761 ntBASIC23.06■■□□□ 1.28
COMMD3-BMI1R4GMX3 AP004833.2-201ENST00000532228 1454 ntBASIC23.05■■□□□ 1.28
COMMD3-BMI1R4GMX3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COMMD3-BMI1R4GMX3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COMMD3-BMI1R4GMX3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COMMD3-BMI1R4GMX3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COMMD3-BMI1R4GMX3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
COMMD3-BMI1R4GMX3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 273.1 ms