Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSMD1Q96PZ7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSMD1Q96PZ7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSMD1Q96PZ7 AC026202.3-201ENST00000600805 1127 ntBASIC21.59■■□□□ 1.05
CSMD1Q96PZ7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSMD1Q96PZ7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSMD1Q96PZ7 AC239859.2-201ENST00000444165 318 ntBASIC21.59■■□□□ 1.05
CSMD1Q96PZ7 PVT1_1.1-201ENST00000615125 194 ntBASIC21.59■■□□□ 1.05
CSMD1Q96PZ7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSMD1Q96PZ7 MIR6765-201ENST00000614092 87 ntBASIC21.58■■□□□ 1.05
CSMD1Q96PZ7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.58■■□□□ 1.05
CSMD1Q96PZ7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.58■■□□□ 1.05
CSMD1Q96PZ7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSMD1Q96PZ7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CSMD1Q96PZ7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSMD1Q96PZ7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSMD1Q96PZ7 AC010864.1-201ENST00000609407 1511 ntBASIC21.56■■□□□ 1.04
CSMD1Q96PZ7 MIR4508-201ENST00000584178 70 ntBASIC21.56■■□□□ 1.04
CSMD1Q96PZ7 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.56■■□□□ 1.04
CSMD1Q96PZ7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.56■■□□□ 1.04
CSMD1Q96PZ7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSMD1Q96PZ7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.56■■□□□ 1.04
CSMD1Q96PZ7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSMD1Q96PZ7 YBX1P4-201ENST00000392794 808 ntBASIC21.55■■□□□ 1.04
CSMD1Q96PZ7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSMD1Q96PZ7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.55■■□□□ 1.04
CSMD1Q96PZ7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSMD1Q96PZ7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.54■■□□□ 1.04
CSMD1Q96PZ7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CSMD1Q96PZ7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSMD1Q96PZ7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.54■■□□□ 1.04
CSMD1Q96PZ7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CSMD1Q96PZ7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CSMD1Q96PZ7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSMD1Q96PZ7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.53■■□□□ 1.04
CSMD1Q96PZ7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.53■■□□□ 1.04
CSMD1Q96PZ7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CSMD1Q96PZ7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CSMD1Q96PZ7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CSMD1Q96PZ7 RAP2CP1-202ENST00000605179 643 ntBASIC21.52■■□□□ 1.04
CSMD1Q96PZ7 AC126177.7-201ENST00000547904 679 ntBASIC21.52■■□□□ 1.04
CSMD1Q96PZ7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.52■■□□□ 1.04
CSMD1Q96PZ7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.52■■□□□ 1.04
CSMD1Q96PZ7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.52■■□□□ 1.04
CSMD1Q96PZ7 AC127502.1-201ENST00000399971 1502 ntBASIC21.52■■□□□ 1.03
CSMD1Q96PZ7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CSMD1Q96PZ7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.51■■□□□ 1.03
CSMD1Q96PZ7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.51■■□□□ 1.03
CSMD1Q96PZ7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CSMD1Q96PZ7 AC092666.2-201ENST00000613287 246 ntBASIC21.51■■□□□ 1.03
CSMD1Q96PZ7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CSMD1Q96PZ7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CSMD1Q96PZ7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.49■■□□□ 1.03
CSMD1Q96PZ7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.49■■□□□ 1.03
CSMD1Q96PZ7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CSMD1Q96PZ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CSMD1Q96PZ7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CSMD1Q96PZ7 AC139795.1-202ENST00000500444 432 ntBASIC21.49■■□□□ 1.03
CSMD1Q96PZ7 AL031848.2-201ENST00000607670 837 ntBASIC21.49■■□□□ 1.03
CSMD1Q96PZ7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSMD1Q96PZ7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.48■■□□□ 1.03
CSMD1Q96PZ7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSMD1Q96PZ7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CSMD1Q96PZ7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CSMD1Q96PZ7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CSMD1Q96PZ7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSMD1Q96PZ7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSMD1Q96PZ7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.46■■□□□ 1.03
CSMD1Q96PZ7 Z92544.1-202ENST00000571933 1220 ntBASIC21.46■■□□□ 1.03
CSMD1Q96PZ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CSMD1Q96PZ7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
CSMD1Q96PZ7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSMD1Q96PZ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSMD1Q96PZ7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.45■■□□□ 1.02
CSMD1Q96PZ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.45■■□□□ 1.02
CSMD1Q96PZ7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.44■■□□□ 1.02
CSMD1Q96PZ7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 AL139246.5-201ENST00000606645 996 ntBASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 AC120057.4-201ENST00000624722 1615 ntBASIC21.43■■□□□ 1.02
CSMD1Q96PZ7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.42■■□□□ 1.02
CSMD1Q96PZ7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms