Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LDLRAD3Q86YD5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.08■□□□□ 0.97
LDLRAD3Q86YD5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.08■□□□□ 0.97
LDLRAD3Q86YD5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LDLRAD3Q86YD5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.08■□□□□ 0.97
LDLRAD3Q86YD5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.08■□□□□ 0.97
LDLRAD3Q86YD5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
LDLRAD3Q86YD5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
LDLRAD3Q86YD5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.08■□□□□ 0.96
LDLRAD3Q86YD5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LDLRAD3Q86YD5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.07■□□□□ 0.96
LDLRAD3Q86YD5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
LDLRAD3Q86YD5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LDLRAD3Q86YD5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.07■□□□□ 0.96
LDLRAD3Q86YD5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LDLRAD3Q86YD5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LDLRAD3Q86YD5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.06■□□□□ 0.96
LDLRAD3Q86YD5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LDLRAD3Q86YD5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LDLRAD3Q86YD5 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LDLRAD3Q86YD5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LDLRAD3Q86YD5 MIR4449-201ENST00000578365 66 ntBASIC21.05■□□□□ 0.96
LDLRAD3Q86YD5 CR559946.2-201ENST00000623684 991 ntBASIC21.05■□□□□ 0.96
LDLRAD3Q86YD5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LDLRAD3Q86YD5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDLRAD3Q86YD5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LDLRAD3Q86YD5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LDLRAD3Q86YD5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.04■□□□□ 0.96
LDLRAD3Q86YD5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.04■□□□□ 0.96
LDLRAD3Q86YD5 AC016575.1-201ENST00000607026 382 ntBASIC21.04■□□□□ 0.96
LDLRAD3Q86YD5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.04■□□□□ 0.96
LDLRAD3Q86YD5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDLRAD3Q86YD5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDLRAD3Q86YD5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
LDLRAD3Q86YD5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LDLRAD3Q86YD5 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.03■□□□□ 0.96
LDLRAD3Q86YD5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.03■□□□□ 0.96
LDLRAD3Q86YD5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LDLRAD3Q86YD5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LDLRAD3Q86YD5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LDLRAD3Q86YD5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
LDLRAD3Q86YD5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LDLRAD3Q86YD5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LDLRAD3Q86YD5 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LDLRAD3Q86YD5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.01■□□□□ 0.95
LDLRAD3Q86YD5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L13-201ENST00000554103 1267 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L15-201ENST00000611059 1267 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L23-201ENST00000615195 1269 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L24-201ENST00000617576 1269 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L22-201ENST00000618238 1269 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L20-201ENST00000619712 1269 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L21-201ENST00000622058 1269 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L10-201ENST00000622460 1267 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 DUX4L25-201ENST00000624915 1269 ntBASIC21■□□□□ 0.95
LDLRAD3Q86YD5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21■□□□□ 0.95
LDLRAD3Q86YD5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 AL449106.1-201ENST00000608517 1980 ntBASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LDLRAD3Q86YD5 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAD3Q86YD5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAD3Q86YD5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LDLRAD3Q86YD5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LDLRAD3Q86YD5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAD3Q86YD5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LDLRAD3Q86YD5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAD3Q86YD5 LINC00273-201ENST00000539813 1452 ntBASIC20.97■□□□□ 0.95
LDLRAD3Q86YD5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAD3Q86YD5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAD3Q86YD5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAD3Q86YD5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LDLRAD3Q86YD5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LDLRAD3Q86YD5 AP002414.2-202ENST00000590929 1450 ntBASIC20.95■□□□□ 0.94
LDLRAD3Q86YD5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAD3Q86YD5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.95■□□□□ 0.94
LDLRAD3Q86YD5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LDLRAD3Q86YD5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms