Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 UNC93B8-201ENST00000511903 705 ntBASIC14.21□□□□□ -0.13
UBR4Q5T4S7 MED25-210ENST00000612854 801 ntTSL 5 BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 MED25-214ENST00000622402 642 ntTSL 5 BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.21□□□□□ -0.14
UBR4Q5T4S7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC14.2□□□□□ -0.14
UBR4Q5T4S7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 MIR4787-201ENST00000607364 84 ntBASIC14.18□□□□□ -0.14
UBR4Q5T4S7 RARRES2P11-201ENST00000635158 484 ntBASIC14.18□□□□□ -0.14
UBR4Q5T4S7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.17□□□□□ -0.14
UBR4Q5T4S7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UBR4Q5T4S7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBR4Q5T4S7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBR4Q5T4S7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.15□□□□□ -0.14
UBR4Q5T4S7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 MIR219A2-201ENST00000608502 1504 ntBASIC14.13□□□□□ -0.15
UBR4Q5T4S7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 MIR6821-201ENST00000617625 74 ntBASIC14.13□□□□□ -0.15
UBR4Q5T4S7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 AC087623.3-201ENST00000607047 1098 ntBASIC14.12□□□□□ -0.15
UBR4Q5T4S7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 RAP2CP1-202ENST00000605179 643 ntBASIC14.11□□□□□ -0.15
UBR4Q5T4S7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms