Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 YEL034C-AYEL034C-A 603 nt8.55□□□□□ -1.04
MSH4P40965 HAM1YJR069C 594 nt8.55□□□□□ -1.04
MSH4P40965 CDA1YLR307W 906 nt8.55□□□□□ -1.04
MSH4P40965 YPL067CYPL067C 597 nt8.55□□□□□ -1.04
MSH4P40965 YEL023CYEL023C 2049 nt8.54□□□□□ -1.04
MSH4P40965 SPS1YDR523C 1473 nt8.54□□□□□ -1.04
MSH4P40965 HRB1YNL004W 1365 nt8.54□□□□□ -1.04
MSH4P40965 ADH6YMR318C 1083 nt8.54□□□□□ -1.04
MSH4P40965 SPE3YPR069C 882 nt8.53□□□□□ -1.04
MSH4P40965 YPT10YBR264C 600 nt8.53□□□□□ -1.04
MSH4P40965 PRY2YKR013W 990 nt8.52□□□□□ -1.05
MSH4P40965 AAD14YNL331C 1131 nt8.52□□□□□ -1.05
MSH4P40965 SGV1YPR161C 1974 nt8.52□□□□□ -1.05
MSH4P40965 snR78snR78 87 nt8.51□□□□□ -1.05
MSH4P40965 SRY1YKL218C 981 nt8.51□□□□□ -1.05
MSH4P40965 UBP13YBL067C 2244 nt8.5□□□□□ -1.05
MSH4P40965 YHR033WYHR033W 1272 nt8.5□□□□□ -1.05
MSH4P40965 MBF1YOR298C-A 456 nt8.5□□□□□ -1.05
MSH4P40965 LGE1YPL055C 999 nt8.5□□□□□ -1.05
MSH4P40965 PDC5YLR134W 1692 nt8.49□□□□□ -1.05
MSH4P40965 PUS4YNL292W 1212 nt8.49□□□□□ -1.05
MSH4P40965 GET2YER083C 858 nt8.48□□□□□ -1.05
MSH4P40965 DSC3YOR223W 879 nt8.48□□□□□ -1.05
MSH4P40965 PIL1YGR086C 1020 nt8.47□□□□□ -1.05
MSH4P40965 PPZ2YDR436W 2133 nt8.47□□□□□ -1.05
MSH4P40965 GUT1YHL032C 2130 nt8.47□□□□□ -1.05
MSH4P40965 SKP1YDR328C 585 nt8.46□□□□□ -1.06
MSH4P40965 ZIM17YNL310C 525 nt8.46□□□□□ -1.06
MSH4P40965 CMK2YOL016C 1344 nt8.46□□□□□ -1.06
MSH4P40965 PLB3YOL011W 2061 nt8.45□□□□□ -1.06
MSH4P40965 ERV25YML012W 636 nt8.45□□□□□ -1.06
MSH4P40965 YML122CYML122C 381 nt8.45□□□□□ -1.06
MSH4P40965 AVL9YLR114C 2295 nt8.45□□□□□ -1.06
MSH4P40965 STF1YDL130W-A 261 nt8.44□□□□□ -1.06
MSH4P40965 YJL107CYJL107C 1164 nt8.44□□□□□ -1.06
MSH4P40965 SNA3YJL151C 402 nt8.44□□□□□ -1.06
MSH4P40965 YOR300WYOR300W 309 nt8.44□□□□□ -1.06
MSH4P40965 YPC1YBR183W 951 nt8.44□□□□□ -1.06
MSH4P40965 DML1YMR211W 1428 nt8.44□□□□□ -1.06
MSH4P40965 PEX28YHR150W 1740 nt8.43□□□□□ -1.06
MSH4P40965 RSC9YML127W 1746 nt8.43□□□□□ -1.06
MSH4P40965 YDR215CYDR215C 414 nt8.43□□□□□ -1.06
MSH4P40965 CKB1YGL019W 837 nt8.42□□□□□ -1.06
MSH4P40965 DAL80YKR034W 810 nt8.42□□□□□ -1.06
MSH4P40965 EDC3YEL015W 1656 nt8.41□□□□□ -1.06
MSH4P40965 NFS1YCL017C 1494 nt8.41□□□□□ -1.06
MSH4P40965 YCR099CYCR099C 468 nt8.4□□□□□ -1.06
MSH4P40965 PET10YKR046C 852 nt8.4□□□□□ -1.06
MSH4P40965 VPS65YLR322W 315 nt8.4□□□□□ -1.06
MSH4P40965 RUP1YOR138C 2016 nt8.4□□□□□ -1.06
MSH4P40965 YCR061WYCR061W 1896 nt8.39□□□□□ -1.07
MSH4P40965 YJL211CYJL211C 444 nt8.39□□□□□ -1.07
MSH4P40965 AST1YBL069W 1290 nt8.39□□□□□ -1.07
MSH4P40965 YNR068CYNR068C 819 nt8.39□□□□□ -1.07
MSH4P40965 RSM23YGL129C 1353 nt8.38□□□□□ -1.07
MSH4P40965 YLR030WYLR030W 792 nt8.38□□□□□ -1.07
MSH4P40965 BDS1YOL164W 1941 nt8.37□□□□□ -1.07
MSH4P40965 OPI1YHL020C 1215 nt8.37□□□□□ -1.07
MSH4P40965 ICL2YPR006C 1728 nt8.37□□□□□ -1.07
MSH4P40965 BNA3YJL060W 1335 nt8.36□□□□□ -1.07
MSH4P40965 YER137CYER137C 447 nt8.36□□□□□ -1.07
MSH4P40965 URE2YNL229C 1065 nt8.36□□□□□ -1.07
MSH4P40965 SNU71YGR013W 1863 nt8.36□□□□□ -1.07
MSH4P40965 TRR1YDR353W 960 nt8.35□□□□□ -1.07
MSH4P40965 RCF2YNR018W 675 nt8.35□□□□□ -1.07
MSH4P40965 snR30snR30 606 nt8.35□□□□□ -1.07
MSH4P40965 BIO3YNR058W 1443 nt8.35□□□□□ -1.07
MSH4P40965 YBL113CYBL113C 2379 nt8.35□□□□□ -1.07
MSH4P40965 HOS2YGL194C 1359 nt8.35□□□□□ -1.07
MSH4P40965 CYS4YGR155W 1524 nt8.34□□□□□ -1.07
MSH4P40965 TUB1YML085C 1344 nt8.34□□□□□ -1.07
MSH4P40965 MPH3YJR160C 1809 nt8.34□□□□□ -1.07
MSH4P40965 YLR162WYLR162W 357 nt8.34□□□□□ -1.07
MSH4P40965 LDB7YBL006C 543 nt8.34□□□□□ -1.07
MSH4P40965 CAR2YLR438W 1275 nt8.34□□□□□ -1.07
MSH4P40965 SWP1YMR149W 861 nt8.34□□□□□ -1.07
MSH4P40965 LEO1YOR123C 1395 nt8.34□□□□□ -1.07
MSH4P40965 EEB1YPL095C 1371 nt8.34□□□□□ -1.07
MSH4P40965 YPQ2YDR352W 954 nt8.33□□□□□ -1.08
MSH4P40965 PDA1YER178W 1263 nt8.33□□□□□ -1.08
MSH4P40965 POR2YIL114C 846 nt8.33□□□□□ -1.08
MSH4P40965 YHC3YJL059W 1227 nt8.33□□□□□ -1.08
MSH4P40965 YKR018CYKR018C 2178 nt8.33□□□□□ -1.08
MSH4P40965 HEL1YKR017C 1656 nt8.33□□□□□ -1.08
MSH4P40965 CIT3YPR001W 1461 nt8.32□□□□□ -1.08
MSH4P40965 PPS1YBR276C 2424 nt8.32□□□□□ -1.08
MSH4P40965 SML1YML058W 315 nt8.32□□□□□ -1.08
MSH4P40965 EHD3YDR036C 1503 nt8.32□□□□□ -1.08
MSH4P40965 SPG1YGR236C 288 nt8.31□□□□□ -1.08
MSH4P40965 YJL213WYJL213W 996 nt8.3□□□□□ -1.08
MSH4P40965 CCW12YLR110C 402 nt8.3□□□□□ -1.08
MSH4P40965 DPM1YPR183W 804 nt8.3□□□□□ -1.08
MSH4P40965 AGP2YBR132C 1791 nt8.3□□□□□ -1.08
MSH4P40965 DCR2YLR361C 1737 nt8.29□□□□□ -1.08
MSH4P40965 ERG10YPL028W 1197 nt8.29□□□□□ -1.08
MSH4P40965 NAF1YNL124W 1479 nt8.29□□□□□ -1.08
MSH4P40965 ACO1YLR304C 2337 nt8.29□□□□□ -1.08
MSH4P40965 YGL118CYGL118C 438 nt8.28□□□□□ -1.08
MSH4P40965 SNF7YLR025W 723 nt8.28□□□□□ -1.08
MSH4P40965 PIC2YER053C 903 nt8.27□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 42.4 ms