Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV34A0A0B4J273 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV34A0A0B4J273 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV34A0A0B4J273 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV34A0A0B4J273 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRAV34A0A0B4J273 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.08■□□□□ 0.65
TRAV34A0A0B4J273 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV34A0A0B4J273 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
TRAV34A0A0B4J273 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV34A0A0B4J273 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV34A0A0B4J273 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRAV34A0A0B4J273 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV34A0A0B4J273 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV34A0A0B4J273 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV34A0A0B4J273 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV34A0A0B4J273 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV34A0A0B4J273 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV34A0A0B4J273 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAV34A0A0B4J273 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV34A0A0B4J273 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV34A0A0B4J273 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TRAV34A0A0B4J273 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV34A0A0B4J273 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV34A0A0B4J273 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV34A0A0B4J273 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV34A0A0B4J273 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAV34A0A0B4J273 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRAV34A0A0B4J273 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.04■□□□□ 0.64
TRAV34A0A0B4J273 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV34A0A0B4J273 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV34A0A0B4J273 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV34A0A0B4J273 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV34A0A0B4J273 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRAV34A0A0B4J273 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV34A0A0B4J273 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV34A0A0B4J273 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV34A0A0B4J273 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV34A0A0B4J273 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRAV34A0A0B4J273 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.02■□□□□ 0.64
TRAV34A0A0B4J273 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TRAV34A0A0B4J273 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRAV34A0A0B4J273 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV34A0A0B4J273 AC018358.1-201ENST00000631079 1402 ntBASIC19■□□□□ 0.63
TRAV34A0A0B4J273 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV34A0A0B4J273 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV34A0A0B4J273 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19■□□□□ 0.63
TRAV34A0A0B4J273 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19■□□□□ 0.63
TRAV34A0A0B4J273 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV34A0A0B4J273 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRAV34A0A0B4J273 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 SETD8P1-201ENST00000623146 1180 ntBASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRAV34A0A0B4J273 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 RARRES2P7-201ENST00000567349 469 ntBASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.98■□□□□ 0.63
TRAV34A0A0B4J273 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV34A0A0B4J273 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRAV34A0A0B4J273 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRAV34A0A0B4J273 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRAV34A0A0B4J273 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV34A0A0B4J273 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.96■□□□□ 0.63
TRAV34A0A0B4J273 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.96■□□□□ 0.63
TRAV34A0A0B4J273 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRAV34A0A0B4J273 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
TRAV34A0A0B4J273 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV34A0A0B4J273 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV34A0A0B4J273 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV34A0A0B4J273 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAV34A0A0B4J273 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRAV34A0A0B4J273 AC092803.2-201ENST00000564287 1899 ntBASIC18.94■□□□□ 0.62
TRAV34A0A0B4J273 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TRAV34A0A0B4J273 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV34A0A0B4J273 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV34A0A0B4J273 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms