Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV9-2A0A087WT02 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV9-2A0A087WT02 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV9-2A0A087WT02 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV9-2A0A087WT02 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV9-2A0A087WT02 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV9-2A0A087WT02 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAV9-2A0A087WT02 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-2A0A087WT02 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-2A0A087WT02 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV9-2A0A087WT02 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-2A0A087WT02 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-2A0A087WT02 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-2A0A087WT02 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV9-2A0A087WT02 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV9-2A0A087WT02 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV9-2A0A087WT02 MIR762-201ENST00000390236 83 ntBASIC18.28■□□□□ 0.52
TRAV9-2A0A087WT02 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV9-2A0A087WT02 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRAV9-2A0A087WT02 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.28■□□□□ 0.52
TRAV9-2A0A087WT02 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV9-2A0A087WT02 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV9-2A0A087WT02 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV9-2A0A087WT02 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV9-2A0A087WT02 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV9-2A0A087WT02 AC005559.1-201ENST00000589661 871 ntBASIC18.27■□□□□ 0.52
TRAV9-2A0A087WT02 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV9-2A0A087WT02 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.27■□□□□ 0.51
TRAV9-2A0A087WT02 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-2A0A087WT02 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV9-2A0A087WT02 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV9-2A0A087WT02 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-2A0A087WT02 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-2A0A087WT02 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-2A0A087WT02 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV9-2A0A087WT02 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV9-2A0A087WT02 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-2A0A087WT02 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-2A0A087WT02 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV9-2A0A087WT02 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV9-2A0A087WT02 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV9-2A0A087WT02 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV9-2A0A087WT02 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 LINC01003-201ENST00000564834 1764 ntBASIC18.22■□□□□ 0.51
TRAV9-2A0A087WT02 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV9-2A0A087WT02 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV9-2A0A087WT02 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV9-2A0A087WT02 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV9-2A0A087WT02 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV9-2A0A087WT02 AC079834.2-201ENST00000609776 1949 ntBASIC18.21■□□□□ 0.51
TRAV9-2A0A087WT02 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV9-2A0A087WT02 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-2A0A087WT02 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV9-2A0A087WT02 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-2A0A087WT02 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-2A0A087WT02 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV9-2A0A087WT02 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 CLDN5-201ENST00000403084 2357 ntBASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms