Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 AC008556.1-201ENST00000610908 2040 ntBASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 C1QL1P1-201ENST00000568105 661 ntBASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 AL357033.4-201ENST00000617703 1807 ntBASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 MYC-209ENST00000641252 345 ntBASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 KRT8P3-201ENST00000519669 1449 ntBASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TMEM56-RWDD3S4R434 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 FLJ13224-201ENST00000313737 1514 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 MIR663A-201ENST00000385250 93 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 AC026271.2-201ENST00000428091 497 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 POU5F1P3-201ENST00000428824 1078 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 CDCA4P2-201ENST00000441182 718 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 AC097658.1-201ENST00000475555 843 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 AC008687.6-201ENST00000596318 630 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 AC139713.2-201ENST00000641328 2723 ntBASIC15.24■□□□□ 0.03
TMEM56-RWDD3S4R434 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms