RNA–Protein interactions for RNA: ENST00000610273.5

PNLDC1-207, Transcript of PARN like, ribonuclease domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PNLDC1, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1-207ENST00000610273 NISCHQ9Y2I1 1504 aa40.49■■■■■ 4.07
PNLDC1-207ENST00000610273 CCDC180Q9P1Z9 1646 aa35.17■■■■□ 3.22
PNLDC1-207ENST00000610273 ZCCHC6Q5VYS8 1495 aaKnown RBP34.09■■■■□ 3.05
PNLDC1-207ENST00000610273 DCAF1Q9Y4B6 1507 aa33.5■■■□□ 2.95
PNLDC1-207ENST00000610273 DCAF8L2P0C7V8 631 aa33.24■■■□□ 2.91
PNLDC1-207ENST00000610273 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
PNLDC1-207ENST00000610273 MYO15BQ96JP2 1530 aa32.98■■■□□ 2.87
PNLDC1-207ENST00000610273 ABCC9O60706 1549 aa32.9■■■□□ 2.86
PNLDC1-207ENST00000610273 NACADO15069 1562 aa32.66■■■□□ 2.82
PNLDC1-207ENST00000610273 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
PNLDC1-207ENST00000610273 RB1CC1Q8TDY2 1594 aa32.29■■■□□ 2.76
PNLDC1-207ENST00000610273 SUPT5HO00267 1087 aaKnown RBP32.12■■■□□ 2.73
PNLDC1-207ENST00000610273 UNC13AQ9UPW8 1703 aa31.68■■■□□ 2.66
PNLDC1-207ENST00000610273 RSF1Q96T23 1441 aaPredicted RBP31.53■■■□□ 2.64
PNLDC1-207ENST00000610273 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
PNLDC1-207ENST00000610273 BICRAQ9NZM4 1560 aa31.32■■■□□ 2.6
PNLDC1-207ENST00000610273 MROH2BQ7Z745 1585 aa31.29■■■□□ 2.6
PNLDC1-207ENST00000610273 BAZ1AQ9NRL2 1556 aaPredicted RBP31.24■■■□□ 2.59
PNLDC1-207ENST00000610273 PABPN1Q86U42 306 aaKnown RBP eCLIP31.07■■■□□ 2.56
PNLDC1-207ENST00000610273 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
PNLDC1-207ENST00000610273 WIZO95785 1651 aa31.06■■■□□ 2.56
PNLDC1-207ENST00000610273 CHIC1Q5VXU3 224 aa30.94■■■□□ 2.54
PNLDC1-207ENST00000610273 TOP2AP11388 1531 aaKnown RBP30.76■■■□□ 2.51
PNLDC1-207ENST00000610273 PEG3Q9GZU2 1588 aa30.69■■■□□ 2.5
PNLDC1-207ENST00000610273 SMARCA2P51531 1590 aa30.48■■■□□ 2.47
PNLDC1-207ENST00000610273 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.46
PNLDC1-207ENST00000610273 CCDC88BA6NC98 1476 aa30.42■■■□□ 2.46
PNLDC1-207ENST00000610273 EIF4G1Q04637 1599 aaKnown RBP30.39■■■□□ 2.46
PNLDC1-207ENST00000610273 BAZ1BQ9UIG0 1483 aaKnown RBP30.3■■■□□ 2.44
PNLDC1-207ENST00000610273 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
PNLDC1-207ENST00000610273 HMGXB3Q12766 1538 aa30.15■■■□□ 2.42
PNLDC1-207ENST00000610273 NCAPD3P42695 1498 aa30.13■■■□□ 2.41
PNLDC1-207ENST00000610273 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
PNLDC1-207ENST00000610273 CC2D2AQ9P2K1 1620 aa29.81■■■□□ 2.36
PNLDC1-207ENST00000610273 LOC105371045A0A1W2PR82 267 aa29.75■■■□□ 2.35
PNLDC1-207ENST00000610273 WRNQ14191 1432 aaPredicted RBP eCLIP29.67■■■□□ 2.34
PNLDC1-207ENST00000610273 FAM9AQ8IZU1 332 aaPredicted RBP29.62■■■□□ 2.33
PNLDC1-207ENST00000610273 CFTRP13569 1480 aa29.56■■■□□ 2.32
PNLDC1-207ENST00000610273 SYNJ1O43426 1573 aa29.55■■■□□ 2.32
PNLDC1-207ENST00000610273 PRDM2Q13029 1718 aa29.48■■■□□ 2.31
PNLDC1-207ENST00000610273 EEA1Q15075 1411 aa29.44■■■□□ 2.3
PNLDC1-207ENST00000610273 TOP2BQ02880 1626 aa29.41■■■□□ 2.3
PNLDC1-207ENST00000610273 SOGA1O94964 1423 aa29.4■■■□□ 2.3
PNLDC1-207ENST00000610273 BIVM-ERCC5R4GMW8 1640 aa29.39■■■□□ 2.3
PNLDC1-207ENST00000610273 CADPSQ9ULU8 1353 aa29.37■■■□□ 2.29
PNLDC1-207ENST00000610273 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
PNLDC1-207ENST00000610273 CUX1P39880 1505 aa29.24■■■□□ 2.27
PNLDC1-207ENST00000610273 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.27
PNLDC1-207ENST00000610273 EHMT2Q96KQ7 1210 aa29.18■■■□□ 2.26
PNLDC1-207ENST00000610273 LAMC3Q9Y6N6 1575 aa29.07■■■□□ 2.24
PNLDC1-207ENST00000610273 FANCD2Q9BXW9 1451 aa29.06■■■□□ 2.24
PNLDC1-207ENST00000610273 KIF21BO75037 1637 aa29.06■■■□□ 2.24
PNLDC1-207ENST00000610273 GOLGA3Q08378 1498 aa29.04■■■□□ 2.24
PNLDC1-207ENST00000610273 CEP164Q9UPV0 1460 aa29.02■■■□□ 2.24
PNLDC1-207ENST00000610273 TNIKQ9UKE5 1360 aa29.01■■■□□ 2.23
PNLDC1-207ENST00000610273 NESP48681 1621 aa29■■■□□ 2.23
PNLDC1-207ENST00000610273 DNAJC5BQ9UF47 199 aa28.89■■■□□ 2.22
PNLDC1-207ENST00000610273 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
PNLDC1-207ENST00000610273 KIF27Q86VH2 1401 aa28.88■■■□□ 2.21
PNLDC1-207ENST00000610273 DNMBPQ6XZF7 1577 aa28.88■■■□□ 2.21
PNLDC1-207ENST00000610273 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
PNLDC1-207ENST00000610273 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
PNLDC1-207ENST00000610273 PDS5BQ9NTI5 1447 aa28.81■■■□□ 2.2
PNLDC1-207ENST00000610273 ERICH3Q5RHP9 1530 aa28.8■■■□□ 2.2
PNLDC1-207ENST00000610273 PRXQ9BXM0 1461 aa28.79■■■□□ 2.2
PNLDC1-207ENST00000610273 RAPGEF2Q9Y4G8 1499 aa28.79■■■□□ 2.2
PNLDC1-207ENST00000610273 TOPBP1Q92547 1522 aa28.79■■■□□ 2.2
PNLDC1-207ENST00000610273 PCGF6Q9BYE7 350 aa28.75■■■□□ 2.19
PNLDC1-207ENST00000610273 CUX2O14529 1486 aa28.73■■■□□ 2.19
PNLDC1-207ENST00000610273 TRIM26Q12899 539 aaPredicted RBP28.7■■■□□ 2.18
PNLDC1-207ENST00000610273 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
PNLDC1-207ENST00000610273 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
PNLDC1-207ENST00000610273 POLA1P09884 1462 aaPredicted RBP28.68■■■□□ 2.18
PNLDC1-207ENST00000610273 ABCA10Q8WWZ4 1543 aa28.63■■■□□ 2.17
PNLDC1-207ENST00000610273 IGF1RP08069 1367 aa28.58■■■□□ 2.17
PNLDC1-207ENST00000610273 CLIP1P30622 1438 aa28.58■■■□□ 2.17
PNLDC1-207ENST00000610273 RAD54L2Q9Y4B4 1467 aa28.57■■■□□ 2.16
PNLDC1-207ENST00000610273 WDR97A6NE52 1622 aa28.53■■■□□ 2.16
PNLDC1-207ENST00000610273 CARMIL1Q5VZK9 1371 aa28.45■■■□□ 2.14
PNLDC1-207ENST00000610273 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
PNLDC1-207ENST00000610273 VPS8Q8N3P4 1428 aa28.39■■■□□ 2.13
PNLDC1-207ENST00000610273 CUL7Q14999 1698 aa28.38■■■□□ 2.13
PNLDC1-207ENST00000610273 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
PNLDC1-207ENST00000610273 TARBP1Q13395 1621 aaKnown RBP28.34■■■□□ 2.13
PNLDC1-207ENST00000610273 PPARGC1BQ86YN6 1023 aaKnown RBP28.31■■■□□ 2.12
PNLDC1-207ENST00000610273 WDR62O43379 1518 aa28.29■■■□□ 2.12
PNLDC1-207ENST00000610273 GAPVD1Q14C86 1478 aa28.27■■■□□ 2.12
PNLDC1-207ENST00000610273 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
PNLDC1-207ENST00000610273 RANGAP1P46060 587 aaPredicted RBP28.25■■■□□ 2.11
PNLDC1-207ENST00000610273 TDRD9Q8NDG6 1382 aaKnown RBP28.25■■■□□ 2.11
PNLDC1-207ENST00000610273 HRCP23327 699 aa28.24■■■□□ 2.11
PNLDC1-207ENST00000610273 ARHGAP35Q9NRY4 1499 aa28.2■■■□□ 2.1
PNLDC1-207ENST00000610273 ERCC6Q03468 1493 aa28.19■■■□□ 2.1
PNLDC1-207ENST00000610273 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
PNLDC1-207ENST00000610273 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
PNLDC1-207ENST00000610273 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
PNLDC1-207ENST00000610273 CTTNBP2Q8WZ74 1663 aa28.12■■■□□ 2.09
PNLDC1-207ENST00000610273 APLP2Q06481 763 aa28.07■■■□□ 2.08
PNLDC1-207ENST00000610273 TTBK1Q5TCY1 1321 aaPredicted RBP28.02■■■□□ 2.08
PNLDC1-207ENST00000610273 AQRO60306 1485 aaKnown RBP eCLIP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms