RNA–Protein interactions for RNA: ENST00000521604.6

TCEA1-208, Transcript of transcription elongation factor A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCEA1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-208ENST00000521604 NISCHQ9Y2I1 1504 aa34.98■■■■□ 3.19
TCEA1-208ENST00000521604 SHROOM4Q9ULL8 1493 aa30.87■■■□□ 2.53
TCEA1-208ENST00000521604 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
TCEA1-208ENST00000521604 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
TCEA1-208ENST00000521604 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
TCEA1-208ENST00000521604 HRCP23327 699 aa29.68■■■□□ 2.34
TCEA1-208ENST00000521604 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
TCEA1-208ENST00000521604 DCAF8L2P0C7V8 631 aa29.62■■■□□ 2.33
TCEA1-208ENST00000521604 PCGF6Q9BYE7 350 aa29.54■■■□□ 2.32
TCEA1-208ENST00000521604 PPARGC1BQ86YN6 1023 aaKnown RBP29.32■■■□□ 2.28
TCEA1-208ENST00000521604 CCDC180Q9P1Z9 1646 aa29.14■■■□□ 2.26
TCEA1-208ENST00000521604 LOC105371045A0A1W2PR82 267 aa29.1■■■□□ 2.25
TCEA1-208ENST00000521604 DCAF1Q9Y4B6 1507 aa28.73■■■□□ 2.19
TCEA1-208ENST00000521604 TRIM26Q12899 539 aaPredicted RBP28.58■■■□□ 2.17
TCEA1-208ENST00000521604 FAM9AQ8IZU1 332 aaPredicted RBP28.29■■■□□ 2.12
TCEA1-208ENST00000521604 EHMT2Q96KQ7 1210 aa28.28■■■□□ 2.12
TCEA1-208ENST00000521604 TRIM41Q8WV44 630 aa28.2■■■□□ 2.11
TCEA1-208ENST00000521604 RSF1Q96T23 1441 aaPredicted RBP28.03■■■□□ 2.08
TCEA1-208ENST00000521604 ZEB1P37275 1124 aaPredicted RBP28.03■■■□□ 2.08
TCEA1-208ENST00000521604 ABCC9O60706 1549 aa28.03■■■□□ 2.08
TCEA1-208ENST00000521604 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
TCEA1-208ENST00000521604 SCAF1Q9H7N4 1312 aaKnown RBP27.83■■■□□ 2.05
TCEA1-208ENST00000521604 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
TCEA1-208ENST00000521604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
TCEA1-208ENST00000521604 PELP1Q8IZL8 1130 aaKnown RBP27.52■■■□□ 2
TCEA1-208ENST00000521604 CECR2Q9BXF3 1484 aa27.51■■□□□ 1.99
TCEA1-208ENST00000521604 CCER1Q8TC90 406 aaPredicted RBP27.47■■□□□ 1.99
TCEA1-208ENST00000521604 TTBK1Q5TCY1 1321 aaPredicted RBP27.45■■□□□ 1.99
TCEA1-208ENST00000521604 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
TCEA1-208ENST00000521604 NEUROD1Q13562 356 aa27.31■■□□□ 1.96
TCEA1-208ENST00000521604 ACIN1Q9UKV3 1341 aaKnown RBP27.26■■□□□ 1.96
TCEA1-208ENST00000521604 WIZO95785 1651 aa27.24■■□□□ 1.95
TCEA1-208ENST00000521604 DIEXFQ68CQ4 756 aaKnown RBP27.18■■□□□ 1.94
TCEA1-208ENST00000521604 GTF3C3Q9Y5Q9 886 aa27.1■■□□□ 1.93
TCEA1-208ENST00000521604 NACADO15069 1562 aa26.97■■□□□ 1.91
TCEA1-208ENST00000521604 CENPBP07199 599 aaPredicted RBP26.96■■□□□ 1.91
TCEA1-208ENST00000521604 ABCC8Q09428 1581 aa26.96■■□□□ 1.91
TCEA1-208ENST00000521604 CCDC88BA6NC98 1476 aa26.95■■□□□ 1.9
TCEA1-208ENST00000521604 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
TCEA1-208ENST00000521604 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.89
TCEA1-208ENST00000521604 SOGA1O94964 1423 aa26.86■■□□□ 1.89
TCEA1-208ENST00000521604 UBTFP17480 764 aaKnown RBP26.86■■□□□ 1.89
TCEA1-208ENST00000521604 EIF4G1Q04637 1599 aaKnown RBP26.85■■□□□ 1.89
TCEA1-208ENST00000521604 YTHDC1Q96MU7 727 aaKnown RBP26.84■■□□□ 1.89
TCEA1-208ENST00000521604 WRNQ14191 1432 aaPredicted RBP eCLIP26.79■■□□□ 1.88
TCEA1-208ENST00000521604 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
TCEA1-208ENST00000521604 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
TCEA1-208ENST00000521604 CSRNP3Q8WYN3 585 aa26.72■■□□□ 1.87
TCEA1-208ENST00000521604 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
TCEA1-208ENST00000521604 HNRNPUL2Q1KMD3 747 aaKnown RBP26.69■■□□□ 1.86
TCEA1-208ENST00000521604 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
TCEA1-208ENST00000521604 MIER1Q8N108 512 aa26.6■■□□□ 1.85
TCEA1-208ENST00000521604 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
TCEA1-208ENST00000521604 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
TCEA1-208ENST00000521604 SMARCA4P51532 1647 aa26.49■■□□□ 1.83
TCEA1-208ENST00000521604 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
TCEA1-208ENST00000521604 EEA1Q15075 1411 aa26.41■■□□□ 1.82
TCEA1-208ENST00000521604 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
TCEA1-208ENST00000521604 APLP2Q06481 763 aa26.29■■□□□ 1.8
TCEA1-208ENST00000521604 CLIP1P30622 1438 aa26.28■■□□□ 1.8
TCEA1-208ENST00000521604 CEP164Q9UPV0 1460 aa26.19■■□□□ 1.78
TCEA1-208ENST00000521604 MYT1Q01538 1121 aa26.16■■□□□ 1.78
TCEA1-208ENST00000521604 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.77
TCEA1-208ENST00000521604 SYNJ1O43426 1573 aa26.14■■□□□ 1.77
TCEA1-208ENST00000521604 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
TCEA1-208ENST00000521604 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
TCEA1-208ENST00000521604 KIF21BO75037 1637 aa26.02■■□□□ 1.76
TCEA1-208ENST00000521604 KANK4Q5T7N3 995 aaPredicted RBP25.94■■□□□ 1.74
TCEA1-208ENST00000521604 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
TCEA1-208ENST00000521604 SUPT16HQ9Y5B9 1047 aaKnown RBP25.89■■□□□ 1.73
TCEA1-208ENST00000521604 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
TCEA1-208ENST00000521604 ITGAEP38570 1179 aa25.87■■□□□ 1.73
TCEA1-208ENST00000521604 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
TCEA1-208ENST00000521604 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
TCEA1-208ENST00000521604 CLSPNQ9HAW4 1339 aa25.77■■□□□ 1.72
TCEA1-208ENST00000521604 PEG3Q9GZU2 1588 aa25.76■■□□□ 1.71
TCEA1-208ENST00000521604 KCNH8Q96L42 1107 aa25.76■■□□□ 1.71
TCEA1-208ENST00000521604 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
TCEA1-208ENST00000521604 TSHZ2Q9NRE2 1034 aa25.62■■□□□ 1.69
TCEA1-208ENST00000521604 TOP2BQ02880 1626 aa25.61■■□□□ 1.69
TCEA1-208ENST00000521604 PRXQ9BXM0 1461 aa25.61■■□□□ 1.69
TCEA1-208ENST00000521604 BCANQ96GW7 911 aa25.6■■□□□ 1.69
TCEA1-208ENST00000521604 CCNB3Q8WWL7 1395 aa25.56■■□□□ 1.68
TCEA1-208ENST00000521604 RRBP1Q9P2E9 1410 aaKnown RBP25.55■■□□□ 1.68
TCEA1-208ENST00000521604 ERICH3Q5RHP9 1530 aa25.5■■□□□ 1.67
TCEA1-208ENST00000521604 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
TCEA1-208ENST00000521604 RAB3GAP2Q9H2M9 1393 aa25.48■■□□□ 1.67
TCEA1-208ENST00000521604 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
TCEA1-208ENST00000521604 HIRIP3Q9BW71 556 aaPredicted RBP25.45■■□□□ 1.66
TCEA1-208ENST00000521604 ARHGAP35Q9NRY4 1499 aa25.42■■□□□ 1.66
TCEA1-208ENST00000521604 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
TCEA1-208ENST00000521604 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
TCEA1-208ENST00000521604 FKBP8Q14318 412 aa25.41■■□□□ 1.66
TCEA1-208ENST00000521604 CUX1P39880 1505 aa25.39■■□□□ 1.66
TCEA1-208ENST00000521604 CUX2O14529 1486 aa25.38■■□□□ 1.65
TCEA1-208ENST00000521604 FAM50AQ14320 339 aaKnown RBP25.38■■□□□ 1.65
TCEA1-208ENST00000521604 ATP1B4Q9UN42 357 aaPredicted RBP25.34■■□□□ 1.65
TCEA1-208ENST00000521604 MAPKBP1O60336 1514 aa25.34■■□□□ 1.65
TCEA1-208ENST00000521604 P3H3Q8IVL6 736 aa25.31■■□□□ 1.64
TCEA1-208ENST00000521604 ANP32EQ9BTT0 268 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms