Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 AC004951.3-201ENST00000418645 1148 ntBASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
TRGV1A0A0A0MS02 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 RCC2P6-201ENST00000526625 1557 ntBASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 RNF165-205ENST00000588679 2904 ntBASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 FAM197Y1-201ENST00000421178 764 ntBASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 UBE2SP1-201ENST00000450587 669 ntBASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 AC026271.3-201ENST00000571884 352 ntBASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 AC011298.2-201ENST00000617989 482 ntBASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRGV1A0A0A0MS02 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 GCSHP5-201ENST00000443090 522 ntBASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 AC098590.1-201ENST00000468126 897 ntBASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms