RNA–Protein interactions for RNA: ENST00000438103.6

SBNO2-202, Transcript of strawberry notch homolog 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SBNO2, Length 4,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO2-202ENST00000438103 NISCHQ9Y2I1 1504 aa30.97■■■□□ 2.55
SBNO2-202ENST00000438103 DCAF8L2P0C7V8 631 aa30.48■■■□□ 2.47
SBNO2-202ENST00000438103 SUPT5HO00267 1087 aaKnown RBP28.11■■■□□ 2.09
SBNO2-202ENST00000438103 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
SBNO2-202ENST00000438103 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
SBNO2-202ENST00000438103 EHMT2Q96KQ7 1210 aa26.98■■□□□ 1.91
SBNO2-202ENST00000438103 APLP2Q06481 763 aa26.86■■□□□ 1.89
SBNO2-202ENST00000438103 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
SBNO2-202ENST00000438103 RANGAP1P46060 587 aaPredicted RBP26.17■■□□□ 1.78
SBNO2-202ENST00000438103 ATP1B4Q9UN42 357 aaPredicted RBP26.13■■□□□ 1.77
SBNO2-202ENST00000438103 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
SBNO2-202ENST00000438103 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
SBNO2-202ENST00000438103 UBTFP17480 764 aaKnown RBP25.96■■□□□ 1.75
SBNO2-202ENST00000438103 TTBK1Q5TCY1 1321 aaPredicted RBP25.93■■□□□ 1.74
SBNO2-202ENST00000438103 ABCC9O60706 1549 aa25.85■■□□□ 1.73
SBNO2-202ENST00000438103 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
SBNO2-202ENST00000438103 CHIC1Q5VXU3 224 aa25.56■■□□□ 1.68
SBNO2-202ENST00000438103 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
SBNO2-202ENST00000438103 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
SBNO2-202ENST00000438103 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
SBNO2-202ENST00000438103 PCGF6Q9BYE7 350 aa25.43■■□□□ 1.66
SBNO2-202ENST00000438103 PELP1Q8IZL8 1130 aaKnown RBP25.33■■□□□ 1.64
SBNO2-202ENST00000438103 DCAF1Q9Y4B6 1507 aa25.22■■□□□ 1.63
SBNO2-202ENST00000438103 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.63
SBNO2-202ENST00000438103 CCER1Q8TC90 406 aaPredicted RBP25.19■■□□□ 1.62
SBNO2-202ENST00000438103 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
SBNO2-202ENST00000438103 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
SBNO2-202ENST00000438103 FBLN2P98095 1184 aa24.92■■□□□ 1.58
SBNO2-202ENST00000438103 ITGAEP38570 1179 aa24.9■■□□□ 1.58
SBNO2-202ENST00000438103 HRCP23327 699 aa24.87■■□□□ 1.57
SBNO2-202ENST00000438103 PPARGC1BQ86YN6 1023 aaKnown RBP24.86■■□□□ 1.57
SBNO2-202ENST00000438103 SCRIBQ14160 1630 aa24.8■■□□□ 1.56
SBNO2-202ENST00000438103 MYT1Q01538 1121 aa24.73■■□□□ 1.55
SBNO2-202ENST00000438103 RSF1Q96T23 1441 aaPredicted RBP24.6■■□□□ 1.53
SBNO2-202ENST00000438103 POLR3GLQ9BT43 218 aa24.53■■□□□ 1.52
SBNO2-202ENST00000438103 CENPBP07199 599 aaPredicted RBP24.51■■□□□ 1.51
SBNO2-202ENST00000438103 TRIM26Q12899 539 aaPredicted RBP24.46■■□□□ 1.51
SBNO2-202ENST00000438103 FAM50AQ14320 339 aaKnown RBP24.41■■□□□ 1.5
SBNO2-202ENST00000438103 SLC4A1APQ9BWU0 796 aaKnown RBP24.35■■□□□ 1.49
SBNO2-202ENST00000438103 NEFLP07196 543 aa24.33■■□□□ 1.49
SBNO2-202ENST00000438103 NACADO15069 1562 aa24.31■■□□□ 1.48
SBNO2-202ENST00000438103 NPM1P06748 294 aaKnown RBP eCLIP24.31■■□□□ 1.48
SBNO2-202ENST00000438103 TRIM52Q96A61 297 aa24.29■■□□□ 1.48
SBNO2-202ENST00000438103 RB1CC1Q8TDY2 1594 aa24.28■■□□□ 1.48
SBNO2-202ENST00000438103 CECR2Q9BXF3 1484 aa24.25■■□□□ 1.47
SBNO2-202ENST00000438103 CDK11AQ9UQ88 783 aaPredicted RBP24.22■■□□□ 1.47
SBNO2-202ENST00000438103 P3H3Q8IVL6 736 aa24.16■■□□□ 1.46
SBNO2-202ENST00000438103 ESF1Q9H501 851 aaKnown RBP24.15■■□□□ 1.46
SBNO2-202ENST00000438103 CSRNP3Q8WYN3 585 aa24.14■■□□□ 1.46
SBNO2-202ENST00000438103 ARID3CA6NKF2 412 aa24.14■■□□□ 1.45
SBNO2-202ENST00000438103 MROH2BQ7Z745 1585 aa24.11■■□□□ 1.45
SBNO2-202ENST00000438103 CNGB1Q14028 1251 aaPredicted RBP24.11■■□□□ 1.45
SBNO2-202ENST00000438103 BCANQ96GW7 911 aa24.06■■□□□ 1.44
SBNO2-202ENST00000438103 ERICH6Q7L0X2 663 aa24.05■■□□□ 1.44
SBNO2-202ENST00000438103 YTHDC1Q96MU7 727 aaKnown RBP24.03■■□□□ 1.44
SBNO2-202ENST00000438103 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
SBNO2-202ENST00000438103 WIZO95785 1651 aa23.96■■□□□ 1.43
SBNO2-202ENST00000438103 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
SBNO2-202ENST00000438103 ZNF326Q5BKZ1 582 aaKnown RBP23.9■■□□□ 1.42
SBNO2-202ENST00000438103 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
SBNO2-202ENST00000438103 BAZ1AQ9NRL2 1556 aaPredicted RBP23.83■■□□□ 1.41
SBNO2-202ENST00000438103 STAG3Q9UJ98 1225 aa23.78■■□□□ 1.4
SBNO2-202ENST00000438103 PLPPR3Q6T4P5 718 aa23.74■■□□□ 1.39
SBNO2-202ENST00000438103 CHGAP10645 457 aaKnown RBP23.65■■□□□ 1.38
SBNO2-202ENST00000438103 PRKCSHP14314 528 aaPredicted RBP23.58■■□□□ 1.37
SBNO2-202ENST00000438103 NEFMP07197 916 aa23.58■■□□□ 1.37
SBNO2-202ENST00000438103 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.36
SBNO2-202ENST00000438103 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
SBNO2-202ENST00000438103 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
SBNO2-202ENST00000438103 DAXXQ9UER7 740 aaPredicted RBP23.57■■□□□ 1.36
SBNO2-202ENST00000438103 TOP2AP11388 1531 aaKnown RBP23.56■■□□□ 1.36
SBNO2-202ENST00000438103 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
SBNO2-202ENST00000438103 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
SBNO2-202ENST00000438103 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
SBNO2-202ENST00000438103 SLC24A1O60721 1099 aa23.51■■□□□ 1.35
SBNO2-202ENST00000438103 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
SBNO2-202ENST00000438103 KCNH8Q96L42 1107 aa23.43■■□□□ 1.34
SBNO2-202ENST00000438103 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
SBNO2-202ENST00000438103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.41■■□□□ 1.343e-6■■□□□ 11.9
SBNO2-202ENST00000438103 SMARCA2P51531 1590 aa23.41■■□□□ 1.34
SBNO2-202ENST00000438103 CLSPNQ9HAW4 1339 aa23.4■■□□□ 1.34
SBNO2-202ENST00000438103 SOGA1O94964 1423 aa23.4■■□□□ 1.34
SBNO2-202ENST00000438103 MTUS2Q5JR59 1369 aa23.4■■□□□ 1.34
SBNO2-202ENST00000438103 ANP32CO43423 234 aa23.35■■□□□ 1.33
SBNO2-202ENST00000438103 CEP162Q5TB80 1403 aa23.35■■□□□ 1.33
SBNO2-202ENST00000438103 ZBTB47Q9UFB7 747 aaPredicted RBP23.34■■□□□ 1.33
SBNO2-202ENST00000438103 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.32
SBNO2-202ENST00000438103 CHIC2Q9UKJ5 165 aa23.31■■□□□ 1.32
SBNO2-202ENST00000438103 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
SBNO2-202ENST00000438103 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
SBNO2-202ENST00000438103 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
SBNO2-202ENST00000438103 ARID4BQ4LE39 1312 aaPredicted RBP23.27■■□□□ 1.32
SBNO2-202ENST00000438103 EEA1Q15075 1411 aa23.27■■□□□ 1.32
SBNO2-202ENST00000438103 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
SBNO2-202ENST00000438103 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
SBNO2-202ENST00000438103 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
SBNO2-202ENST00000438103 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
SBNO2-202ENST00000438103 TONSLQ96HA7 1378 aa23.2■■□□□ 1.3
SBNO2-202ENST00000438103 KIF27Q86VH2 1401 aa23.18■■□□□ 1.3
SBNO2-202ENST00000438103 BCL11AQ9H165 835 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms