Protein–RNA interactions for Protein: Q96FF7

MISP3, Uncharacterized protein MISP3, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MISP3Q96FF7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MISP3Q96FF7 DUX4L28-201ENST00000623687 678 ntBASIC20.08■□□□□ 0.81
MISP3Q96FF7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.08■□□□□ 0.8
MISP3Q96FF7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MISP3Q96FF7 AL121749.1-202ENST00000609313 2153 ntBASIC20.08■□□□□ 0.8
MISP3Q96FF7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MISP3Q96FF7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.07■□□□□ 0.8
MISP3Q96FF7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.07■□□□□ 0.8
MISP3Q96FF7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MISP3Q96FF7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MISP3Q96FF7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.06■□□□□ 0.8
MISP3Q96FF7 MIR3665-201ENST00000578708 105 ntBASIC20.06■□□□□ 0.8
MISP3Q96FF7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MISP3Q96FF7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.06■□□□□ 0.8
MISP3Q96FF7 MIR6090-201ENST00000622481 60 ntBASIC20.06■□□□□ 0.8
MISP3Q96FF7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.06■□□□□ 0.8
MISP3Q96FF7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MISP3Q96FF7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MISP3Q96FF7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
MISP3Q96FF7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MISP3Q96FF7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MISP3Q96FF7 LINC01003-201ENST00000564834 1764 ntBASIC20.05■□□□□ 0.8
MISP3Q96FF7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
MISP3Q96FF7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.04■□□□□ 0.8
MISP3Q96FF7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MISP3Q96FF7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
MISP3Q96FF7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.04■□□□□ 0.8
MISP3Q96FF7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.04■□□□□ 0.8
MISP3Q96FF7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MISP3Q96FF7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.03■□□□□ 0.8
MISP3Q96FF7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
MISP3Q96FF7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MISP3Q96FF7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.03■□□□□ 0.8
MISP3Q96FF7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
MISP3Q96FF7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.02■□□□□ 0.8
MISP3Q96FF7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MISP3Q96FF7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
MISP3Q96FF7 AC135983.2-203ENST00000454486 1613 ntBASIC20.02■□□□□ 0.79
MISP3Q96FF7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
MISP3Q96FF7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MISP3Q96FF7 AP002414.2-202ENST00000590929 1450 ntBASIC20.01■□□□□ 0.79
MISP3Q96FF7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MISP3Q96FF7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
MISP3Q96FF7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.01■□□□□ 0.79
MISP3Q96FF7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
MISP3Q96FF7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
MISP3Q96FF7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20■□□□□ 0.79
MISP3Q96FF7 AP006261.1-201ENST00000584783 668 ntBASIC20■□□□□ 0.79
MISP3Q96FF7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MISP3Q96FF7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MISP3Q96FF7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
MISP3Q96FF7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MISP3Q96FF7 WHAMMP2-203ENST00000563942 1603 ntBASIC19.99■□□□□ 0.79
MISP3Q96FF7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.99■□□□□ 0.79
MISP3Q96FF7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.99■□□□□ 0.79
MISP3Q96FF7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
MISP3Q96FF7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
MISP3Q96FF7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
MISP3Q96FF7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MISP3Q96FF7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.98■□□□□ 0.79
MISP3Q96FF7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
MISP3Q96FF7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
MISP3Q96FF7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
MISP3Q96FF7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
MISP3Q96FF7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.97■□□□□ 0.79
MISP3Q96FF7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.97■□□□□ 0.79
MISP3Q96FF7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.97■□□□□ 0.79
MISP3Q96FF7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MISP3Q96FF7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.97■□□□□ 0.79
MISP3Q96FF7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.97■□□□□ 0.79
MISP3Q96FF7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MISP3Q96FF7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
MISP3Q96FF7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.96■□□□□ 0.79
MISP3Q96FF7 LINC00273-201ENST00000539813 1452 ntBASIC19.96■□□□□ 0.79
MISP3Q96FF7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
MISP3Q96FF7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
MISP3Q96FF7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
MISP3Q96FF7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MISP3Q96FF7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MISP3Q96FF7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
MISP3Q96FF7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MISP3Q96FF7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
MISP3Q96FF7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.93■□□□□ 0.78
MISP3Q96FF7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MISP3Q96FF7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MISP3Q96FF7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MISP3Q96FF7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MISP3Q96FF7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
MISP3Q96FF7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
MISP3Q96FF7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MISP3Q96FF7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MISP3Q96FF7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MISP3Q96FF7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC19.92■□□□□ 0.78
MISP3Q96FF7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MISP3Q96FF7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MISP3Q96FF7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
MISP3Q96FF7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MISP3Q96FF7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MISP3Q96FF7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MISP3Q96FF7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms