Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALMS1Q8TCU4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ALMS1Q8TCU4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.47■□□□□ 0.39
ALMS1Q8TCU4 AC126177.7-201ENST00000547904 679 ntBASIC17.47■□□□□ 0.39
ALMS1Q8TCU4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALMS1Q8TCU4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALMS1Q8TCU4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ALMS1Q8TCU4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ALMS1Q8TCU4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ALMS1Q8TCU4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALMS1Q8TCU4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALMS1Q8TCU4 AC010980.1-201ENST00000587192 1142 ntBASIC17.45■□□□□ 0.38
ALMS1Q8TCU4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
ALMS1Q8TCU4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ALMS1Q8TCU4 AC131212.1-201ENST00000613771 668 ntBASIC17.45■□□□□ 0.38
ALMS1Q8TCU4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 SPCS2P3-201ENST00000500401 656 ntBASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 AC133552.2-201ENST00000619106 1032 ntBASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 AC103834.1-201ENST00000520383 144 ntBASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ALMS1Q8TCU4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 AC025884.2-201ENST00000553429 711 ntBASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 MIR935-201ENST00000401179 91 ntBASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.43■□□□□ 0.38
ALMS1Q8TCU4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.42■□□□□ 0.38
ALMS1Q8TCU4 AC026202.3-201ENST00000600805 1127 ntBASIC17.42■□□□□ 0.38
ALMS1Q8TCU4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ALMS1Q8TCU4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.42■□□□□ 0.38
ALMS1Q8TCU4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.42■□□□□ 0.38
ALMS1Q8TCU4 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.41■□□□□ 0.38
ALMS1Q8TCU4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALMS1Q8TCU4 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.41■□□□□ 0.38
ALMS1Q8TCU4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 GUSBP5-201ENST00000418136 578 ntBASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 RAP2CP1-202ENST00000605179 643 ntBASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALMS1Q8TCU4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALMS1Q8TCU4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALMS1Q8TCU4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ALMS1Q8TCU4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.39■□□□□ 0.37
ALMS1Q8TCU4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.38■□□□□ 0.37
ALMS1Q8TCU4 AC139795.1-202ENST00000500444 432 ntBASIC17.38■□□□□ 0.37
ALMS1Q8TCU4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALMS1Q8TCU4 AL356441.2-201ENST00000443009 864 ntBASIC17.38■□□□□ 0.37
ALMS1Q8TCU4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALMS1Q8TCU4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ALMS1Q8TCU4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
ALMS1Q8TCU4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALMS1Q8TCU4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.35■□□□□ 0.37
ALMS1Q8TCU4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ALMS1Q8TCU4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ALMS1Q8TCU4 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC17.34■□□□□ 0.37
ALMS1Q8TCU4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALMS1Q8TCU4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALMS1Q8TCU4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.34■□□□□ 0.37
ALMS1Q8TCU4 BHLHE23-202ENST00000612929 1109 ntBASIC17.34■□□□□ 0.37
ALMS1Q8TCU4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ALMS1Q8TCU4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.34■□□□□ 0.37
ALMS1Q8TCU4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.33■□□□□ 0.37
ALMS1Q8TCU4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ALMS1Q8TCU4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.33■□□□□ 0.37
ALMS1Q8TCU4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
ALMS1Q8TCU4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.33■□□□□ 0.36
ALMS1Q8TCU4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.33■□□□□ 0.36
ALMS1Q8TCU4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.33■□□□□ 0.36
ALMS1Q8TCU4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.32■□□□□ 0.36
ALMS1Q8TCU4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.32■□□□□ 0.36
ALMS1Q8TCU4 PVT1_1.1-201ENST00000615125 194 ntBASIC17.32■□□□□ 0.36
ALMS1Q8TCU4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.32■□□□□ 0.36
ALMS1Q8TCU4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALMS1Q8TCU4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALMS1Q8TCU4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ALMS1Q8TCU4 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ALMS1Q8TCU4 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms