Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC168Q8NDH2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC168Q8NDH2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC168Q8NDH2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC168Q8NDH2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC168Q8NDH2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC168Q8NDH2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC168Q8NDH2 AC025884.2-201ENST00000553429 711 ntBASIC21.55■■□□□ 1.04
CCDC168Q8NDH2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.54■■□□□ 1.04
CCDC168Q8NDH2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC168Q8NDH2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC168Q8NDH2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CCDC168Q8NDH2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC168Q8NDH2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC168Q8NDH2 RAP2CP1-202ENST00000605179 643 ntBASIC21.53■■□□□ 1.04
CCDC168Q8NDH2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC168Q8NDH2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCDC168Q8NDH2 AC010864.1-201ENST00000609407 1511 ntBASIC21.53■■□□□ 1.04
CCDC168Q8NDH2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCDC168Q8NDH2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC168Q8NDH2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CCDC168Q8NDH2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.52■■□□□ 1.04
CCDC168Q8NDH2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCDC168Q8NDH2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.52■■□□□ 1.04
CCDC168Q8NDH2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.51■■□□□ 1.03
CCDC168Q8NDH2 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCDC168Q8NDH2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.51■■□□□ 1.03
CCDC168Q8NDH2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCDC168Q8NDH2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC168Q8NDH2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.5■■□□□ 1.03
CCDC168Q8NDH2 YBX1P4-201ENST00000392794 808 ntBASIC21.5■■□□□ 1.03
CCDC168Q8NDH2 BHLHE23-202ENST00000612929 1109 ntBASIC21.5■■□□□ 1.03
CCDC168Q8NDH2 SMPD5-203ENST00000639008 1464 ntBASIC21.49■■□□□ 1.03
CCDC168Q8NDH2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC168Q8NDH2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC168Q8NDH2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC168Q8NDH2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 AC127502.1-201ENST00000399971 1502 ntBASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 AC074183.2-201ENST00000623112 922 ntBASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 AC126177.7-201ENST00000547904 679 ntBASIC21.48■■□□□ 1.03
CCDC168Q8NDH2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC168Q8NDH2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC168Q8NDH2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC168Q8NDH2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC168Q8NDH2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC168Q8NDH2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC168Q8NDH2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC168Q8NDH2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC168Q8NDH2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC168Q8NDH2 AC026202.3-201ENST00000600805 1127 ntBASIC21.46■■□□□ 1.03
CCDC168Q8NDH2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC168Q8NDH2 AL161658.1-201ENST00000623641 1967 ntBASIC21.45■■□□□ 1.02
CCDC168Q8NDH2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC168Q8NDH2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC168Q8NDH2 AC103834.1-201ENST00000520383 144 ntBASIC21.45■■□□□ 1.02
CCDC168Q8NDH2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC168Q8NDH2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC168Q8NDH2 AC139795.1-202ENST00000500444 432 ntBASIC21.45■■□□□ 1.02
CCDC168Q8NDH2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC168Q8NDH2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC168Q8NDH2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC168Q8NDH2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC168Q8NDH2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC168Q8NDH2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC168Q8NDH2 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC168Q8NDH2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC168Q8NDH2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC168Q8NDH2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC168Q8NDH2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC168Q8NDH2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCDC168Q8NDH2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC168Q8NDH2 AC103724.3-201ENST00000564481 992 ntBASIC21.41■■□□□ 1.02
CCDC168Q8NDH2 AC120057.4-201ENST00000624722 1615 ntBASIC21.41■■□□□ 1.02
CCDC168Q8NDH2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC168Q8NDH2 AC008406.3-201ENST00000620001 1374 ntBASIC21.41■■□□□ 1.02
CCDC168Q8NDH2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC168Q8NDH2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC168Q8NDH2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC168Q8NDH2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CCDC168Q8NDH2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC168Q8NDH2 MIR4508-201ENST00000584178 70 ntBASIC21.39■■□□□ 1.02
CCDC168Q8NDH2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CCDC168Q8NDH2 AC093536.1-201ENST00000569153 554 ntBASIC21.39■■□□□ 1.01
CCDC168Q8NDH2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.38■■□□□ 1.01
CCDC168Q8NDH2 MIR6765-201ENST00000614092 87 ntBASIC21.38■■□□□ 1.01
CCDC168Q8NDH2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC168Q8NDH2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC168Q8NDH2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC168Q8NDH2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC168Q8NDH2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
CCDC168Q8NDH2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC168Q8NDH2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC168Q8NDH2 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms