Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SNAI3Q3KNW1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
SNAI3Q3KNW1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SNAI3Q3KNW1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.82■■□□□ 1.08
SNAI3Q3KNW1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SNAI3Q3KNW1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNAI3Q3KNW1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SNAI3Q3KNW1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAI3Q3KNW1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAI3Q3KNW1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.81■■□□□ 1.08
SNAI3Q3KNW1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SNAI3Q3KNW1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAI3Q3KNW1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SNAI3Q3KNW1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SNAI3Q3KNW1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAI3Q3KNW1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SNAI3Q3KNW1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.8■■□□□ 1.08
SNAI3Q3KNW1 LINC01971-201ENST00000617888 1048 ntBASIC21.8■■□□□ 1.08
SNAI3Q3KNW1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.8■■□□□ 1.08
SNAI3Q3KNW1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SNAI3Q3KNW1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.8■■□□□ 1.08
SNAI3Q3KNW1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.79■■□□□ 1.08
SNAI3Q3KNW1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAI3Q3KNW1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAI3Q3KNW1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.79■■□□□ 1.08
SNAI3Q3KNW1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAI3Q3KNW1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAI3Q3KNW1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SNAI3Q3KNW1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SNAI3Q3KNW1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SNAI3Q3KNW1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNAI3Q3KNW1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.78■■□□□ 1.08
SNAI3Q3KNW1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SNAI3Q3KNW1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SNAI3Q3KNW1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNAI3Q3KNW1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
SNAI3Q3KNW1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SNAI3Q3KNW1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNAI3Q3KNW1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNAI3Q3KNW1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SNAI3Q3KNW1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SNAI3Q3KNW1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNAI3Q3KNW1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SNAI3Q3KNW1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SNAI3Q3KNW1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.75■■□□□ 1.07
SNAI3Q3KNW1 ZNRF2P2-203ENST00000454624 420 ntBASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNAI3Q3KNW1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 DUX4L11-201ENST00000611504 1267 ntBASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 DUX4L12-201ENST00000614593 1267 ntBASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 DUX4L14-201ENST00000621227 1267 ntBASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNAI3Q3KNW1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L13-201ENST00000554103 1267 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L15-201ENST00000611059 1267 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L23-201ENST00000615195 1269 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L24-201ENST00000617576 1269 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L22-201ENST00000618238 1269 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L20-201ENST00000619712 1269 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L21-201ENST00000622058 1269 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L10-201ENST00000622460 1267 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 DUX4L25-201ENST00000624915 1269 ntBASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNAI3Q3KNW1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.7■■□□□ 1.06
SNAI3Q3KNW1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAI3Q3KNW1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAI3Q3KNW1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.69■■□□□ 1.06
SNAI3Q3KNW1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SNAI3Q3KNW1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.69■■□□□ 1.06
SNAI3Q3KNW1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SNAI3Q3KNW1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNAI3Q3KNW1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SNAI3Q3KNW1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNAI3Q3KNW1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
SNAI3Q3KNW1 ABHD17AP4-201ENST00000411545 909 ntBASIC21.67■■□□□ 1.06
SNAI3Q3KNW1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.67■■□□□ 1.06
SNAI3Q3KNW1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAI3Q3KNW1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms