Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB5BP61020 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB5BP61020 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB5BP61020 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB5BP61020 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB5BP61020 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB5BP61020 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB5BP61020 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB5BP61020 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB5BP61020 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB5BP61020 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
RAB5BP61020 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RAB5BP61020 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB5BP61020 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB5BP61020 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.83■□□□□ 0.76
RAB5BP61020 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB5BP61020 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RAB5BP61020 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB5BP61020 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB5BP61020 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB5BP61020 AC145676.1-201ENST00000514988 2004 ntBASIC19.81■□□□□ 0.76
RAB5BP61020 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB5BP61020 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB5BP61020 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB5BP61020 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB5BP61020 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB5BP61020 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB5BP61020 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5BP61020 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5BP61020 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB5BP61020 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5BP61020 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5BP61020 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5BP61020 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5BP61020 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5BP61020 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5BP61020 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB5BP61020 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5BP61020 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5BP61020 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5BP61020 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB5BP61020 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5BP61020 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5BP61020 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.76■□□□□ 0.75
RAB5BP61020 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAB5BP61020 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAB5BP61020 AL135925.1-201ENST00000605920 1701 ntBASIC19.76■□□□□ 0.75
RAB5BP61020 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB5BP61020 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB5BP61020 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB5BP61020 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB5BP61020 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RAB5BP61020 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB5BP61020 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB5BP61020 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB5BP61020 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB5BP61020 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAB5BP61020 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RAB5BP61020 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB5BP61020 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RAB5BP61020 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB5BP61020 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB5BP61020 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB5BP61020 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB5BP61020 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB5BP61020 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5BP61020 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5BP61020 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5BP61020 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB5BP61020 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB5BP61020 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAB5BP61020 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB5BP61020 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB5BP61020 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB5BP61020 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RAB5BP61020 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB5BP61020 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.69■□□□□ 0.74
RAB5BP61020 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB5BP61020 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB5BP61020 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB5BP61020 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
RAB5BP61020 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB5BP61020 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB5BP61020 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB5BP61020 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB5BP61020 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB5BP61020 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RAB5BP61020 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
RAB5BP61020 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB5BP61020 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms