Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT20P35900 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT20P35900 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.66■■□□□ 1.38
KRT20P35900 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT20P35900 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
KRT20P35900 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT20P35900 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT20P35900 LINC01971-201ENST00000617888 1048 ntBASIC23.65■■□□□ 1.38
KRT20P35900 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KRT20P35900 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
KRT20P35900 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KRT20P35900 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
KRT20P35900 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.64■■□□□ 1.37
KRT20P35900 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KRT20P35900 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.63■■□□□ 1.37
KRT20P35900 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.63■■□□□ 1.37
KRT20P35900 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.63■■□□□ 1.37
KRT20P35900 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
KRT20P35900 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
KRT20P35900 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT20P35900 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.62■■□□□ 1.37
KRT20P35900 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.61■■□□□ 1.37
KRT20P35900 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KRT20P35900 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.61■■□□□ 1.37
KRT20P35900 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT20P35900 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT20P35900 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT20P35900 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.6■■□□□ 1.37
KRT20P35900 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.6■■□□□ 1.37
KRT20P35900 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.6■■□□□ 1.37
KRT20P35900 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT20P35900 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT20P35900 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
KRT20P35900 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.59■■□□□ 1.37
KRT20P35900 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.59■■□□□ 1.37
KRT20P35900 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT20P35900 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.58■■□□□ 1.37
KRT20P35900 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.58■■□□□ 1.37
KRT20P35900 AC100797.4-201ENST00000631653 1827 ntBASIC23.58■■□□□ 1.37
KRT20P35900 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
KRT20P35900 BX255925.1-201ENST00000566954 1854 ntBASIC23.58■■□□□ 1.36
KRT20P35900 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
KRT20P35900 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT20P35900 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.57■■□□□ 1.36
KRT20P35900 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
KRT20P35900 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KRT20P35900 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT20P35900 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT20P35900 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KRT20P35900 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT20P35900 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KRT20P35900 DUX4L11-201ENST00000611504 1267 ntBASIC23.56■■□□□ 1.36
KRT20P35900 DUX4L12-201ENST00000614593 1267 ntBASIC23.56■■□□□ 1.36
KRT20P35900 DUX4L14-201ENST00000621227 1267 ntBASIC23.56■■□□□ 1.36
KRT20P35900 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KRT20P35900 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KRT20P35900 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT20P35900 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.55■■□□□ 1.36
KRT20P35900 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KRT20P35900 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
KRT20P35900 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT20P35900 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
KRT20P35900 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.54■■□□□ 1.36
KRT20P35900 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
KRT20P35900 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.53■■□□□ 1.36
KRT20P35900 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
KRT20P35900 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
KRT20P35900 MIR7108-201ENST00000614319 87 ntBASIC23.53■■□□□ 1.36
KRT20P35900 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.53■■□□□ 1.36
KRT20P35900 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.52■■□□□ 1.36
KRT20P35900 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
KRT20P35900 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT20P35900 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
KRT20P35900 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
KRT20P35900 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.51■■□□□ 1.35
KRT20P35900 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.51■■□□□ 1.35
KRT20P35900 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.51■■□□□ 1.35
KRT20P35900 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.5■■□□□ 1.35
KRT20P35900 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
KRT20P35900 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT20P35900 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L13-201ENST00000554103 1267 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L15-201ENST00000611059 1267 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L23-201ENST00000615195 1269 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L24-201ENST00000617576 1269 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L22-201ENST00000618238 1269 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L20-201ENST00000619712 1269 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L21-201ENST00000622058 1269 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L10-201ENST00000622460 1267 ntBASIC23.5■■□□□ 1.35
KRT20P35900 DUX4L25-201ENST00000624915 1269 ntBASIC23.5■■□□□ 1.35
KRT20P35900 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
KRT20P35900 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
KRT20P35900 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT20P35900 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT20P35900 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT20P35900 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
KRT20P35900 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
KRT20P35900 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.48■■□□□ 1.35
KRT20P35900 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.48■■□□□ 1.35
KRT20P35900 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms