Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 STS1YIR011C 960 nt7.09□□□□□ -1.27
TY2A-LR1P0C2J4 ERV2YPR037C 591 nt7.09□□□□□ -1.27
TY2A-LR1P0C2J4 PEX28YHR150W 1740 nt7.08□□□□□ -1.28
TY2A-LR1P0C2J4 GET2YER083C 858 nt7.08□□□□□ -1.28
TY2A-LR1P0C2J4 BNS1YGR230W 414 nt7.08□□□□□ -1.28
TY2A-LR1P0C2J4 NCA3YJL116C 1014 nt7.08□□□□□ -1.28
TY2A-LR1P0C2J4 RCF2YNR018W 675 nt7.08□□□□□ -1.28
TY2A-LR1P0C2J4 SPS1YDR523C 1473 nt7.08□□□□□ -1.28
TY2A-LR1P0C2J4 SLM3YDL033C 1254 nt7.07□□□□□ -1.28
TY2A-LR1P0C2J4 MET30YIL046W 1923 nt7.07□□□□□ -1.28
TY2A-LR1P0C2J4 YRF1-1YDR545W 5391 nt7.07□□□□□ -1.28
TY2A-LR1P0C2J4 YRF1-5YLR467W 5391 nt7.07□□□□□ -1.28
TY2A-LR1P0C2J4 YRF1-8YOR396W 5391 nt7.07□□□□□ -1.28
TY2A-LR1P0C2J4 YDR215CYDR215C 414 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 DAL80YKR034W 810 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 VPS65YLR322W 315 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 YLR358CYLR358C 564 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 CAR2YLR438W 1275 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 YPT10YBR264C 600 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 PDC5YLR134W 1692 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 PPZ2YDR436W 2133 nt7.06□□□□□ -1.28
TY2A-LR1P0C2J4 EDC2YER035W 438 nt7.05□□□□□ -1.28
TY2A-LR1P0C2J4 YJR142WYJR142W 1029 nt7.05□□□□□ -1.28
TY2A-LR1P0C2J4 SGF73YGL066W 1974 nt7.05□□□□□ -1.28
TY2A-LR1P0C2J4 OSM1YJR051W 1506 nt7.05□□□□□ -1.28
TY2A-LR1P0C2J4 TOM71YHR117W 1920 nt7.05□□□□□ -1.28
TY2A-LR1P0C2J4 YNL190WYNL190W 615 nt7.04□□□□□ -1.28
TY2A-LR1P0C2J4 CRN1YLR429W 1956 nt7.04□□□□□ -1.28
TY2A-LR1P0C2J4 ARO7YPR060C 771 nt7.03□□□□□ -1.28
TY2A-LR1P0C2J4 ADE2YOR128C 1716 nt7.03□□□□□ -1.28
TY2A-LR1P0C2J4 RUP1YOR138C 2016 nt7.02□□□□□ -1.29
TY2A-LR1P0C2J4 OPI1YHL020C 1215 nt7.02□□□□□ -1.29
TY2A-LR1P0C2J4 DSC3YOR223W 879 nt7.02□□□□□ -1.29
TY2A-LR1P0C2J4 SNA3YJL151C 402 nt7.01□□□□□ -1.29
TY2A-LR1P0C2J4 SNF7YLR025W 723 nt7.01□□□□□ -1.29
TY2A-LR1P0C2J4 YOR300WYOR300W 309 nt7.01□□□□□ -1.29
TY2A-LR1P0C2J4 YGL081WYGL081W 963 nt7□□□□□ -1.29
TY2A-LR1P0C2J4 YAH1YPL252C 519 nt7□□□□□ -1.29
TY2A-LR1P0C2J4 YPL264CYPL264C 1062 nt7□□□□□ -1.29
TY2A-LR1P0C2J4 MSI1YBR195C 1269 nt7□□□□□ -1.29
TY2A-LR1P0C2J4 SNU71YGR013W 1863 nt6.99□□□□□ -1.29
TY2A-LR1P0C2J4 NMA2YGR010W 1188 nt6.99□□□□□ -1.29
TY2A-LR1P0C2J4 RTC2YBR147W 891 nt6.99□□□□□ -1.29
TY2A-LR1P0C2J4 HRB1YNL004W 1365 nt6.98□□□□□ -1.29
TY2A-LR1P0C2J4 SKP1YDR328C 585 nt6.98□□□□□ -1.29
TY2A-LR1P0C2J4 TPI1YDR050C 747 nt6.97□□□□□ -1.29
TY2A-LR1P0C2J4 PRY2YKR013W 990 nt6.97□□□□□ -1.29
TY2A-LR1P0C2J4 BDS1YOL164W 1941 nt6.97□□□□□ -1.29
TY2A-LR1P0C2J4 CDC3YLR314C 1563 nt6.96□□□□□ -1.29
TY2A-LR1P0C2J4 MAS2YHR024C 1449 nt6.96□□□□□ -1.3
TY2A-LR1P0C2J4 DOC1YGL240W 753 nt6.96□□□□□ -1.3
TY2A-LR1P0C2J4 YJL211CYJL211C 444 nt6.96□□□□□ -1.3
TY2A-LR1P0C2J4 YOR268CYOR268C 399 nt6.96□□□□□ -1.3
TY2A-LR1P0C2J4 YEL023CYEL023C 2049 nt6.96□□□□□ -1.3
TY2A-LR1P0C2J4 CIT3YPR001W 1461 nt6.95□□□□□ -1.3
TY2A-LR1P0C2J4 HNM1YGL077C 1692 nt6.95□□□□□ -1.3
TY2A-LR1P0C2J4 YBL113CYBL113C 2379 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 LAS17YOR181W 1902 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 DCR2YLR361C 1737 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 YDR327WYDR327W 327 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 TOM20YGR082W 552 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 PIL1YGR086C 1020 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 AIM34YMR003W 597 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 ERG24YNL280C 1317 nt6.94□□□□□ -1.3
TY2A-LR1P0C2J4 HXT9YJL219W 1704 nt6.93□□□□□ -1.3
TY2A-LR1P0C2J4 ALR1YOL130W 2580 nt6.93□□□□□ -1.3
TY2A-LR1P0C2J4 YHC3YJL059W 1227 nt6.93□□□□□ -1.3
TY2A-LR1P0C2J4 YLR030WYLR030W 792 nt6.93□□□□□ -1.3
TY2A-LR1P0C2J4 ATP23YNR020C 813 nt6.93□□□□□ -1.3
TY2A-LR1P0C2J4 CKI1YLR133W 1749 nt6.93□□□□□ -1.3
TY2A-LR1P0C2J4 BAP3YDR046C 1815 nt6.92□□□□□ -1.3
TY2A-LR1P0C2J4 GNA1YFL017C 480 nt6.92□□□□□ -1.3
TY2A-LR1P0C2J4 YER152CYER152C 1332 nt6.92□□□□□ -1.3
TY2A-LR1P0C2J4 EEB1YPL095C 1371 nt6.92□□□□□ -1.3
TY2A-LR1P0C2J4 EHD3YDR036C 1503 nt6.91□□□□□ -1.3
TY2A-LR1P0C2J4 YLR122CYLR122C 378 nt6.91□□□□□ -1.3
TY2A-LR1P0C2J4 PRE5YMR314W 705 nt6.91□□□□□ -1.3
TY2A-LR1P0C2J4 RTG2YGL252C 1767 nt6.9□□□□□ -1.3
TY2A-LR1P0C2J4 TCB1YOR086C 3561 nt6.9□□□□□ -1.3
TY2A-LR1P0C2J4 CCW12YLR110C 402 nt6.9□□□□□ -1.3
TY2A-LR1P0C2J4 SWP1YMR149W 861 nt6.9□□□□□ -1.3
TY2A-LR1P0C2J4 PIH1YHR034C 1035 nt6.89□□□□□ -1.31
TY2A-LR1P0C2J4 YJL213WYJL213W 996 nt6.89□□□□□ -1.31
TY2A-LR1P0C2J4 YOR041CYOR041C 432 nt6.89□□□□□ -1.31
TY2A-LR1P0C2J4 AFG3YER017C 2286 nt6.88□□□□□ -1.31
TY2A-LR1P0C2J4 MAL31YBR298C 1845 nt6.88□□□□□ -1.31
TY2A-LR1P0C2J4 PAM17YKR065C 594 nt6.88□□□□□ -1.31
TY2A-LR1P0C2J4 YML079WYML079W 606 nt6.88□□□□□ -1.31
TY2A-LR1P0C2J4 YML122CYML122C 381 nt6.88□□□□□ -1.31
TY2A-LR1P0C2J4 ADH6YMR318C 1083 nt6.88□□□□□ -1.31
TY2A-LR1P0C2J4 MSS51YLR203C 1311 nt6.87□□□□□ -1.31
TY2A-LR1P0C2J4 CHA1YCL064C 1083 nt6.87□□□□□ -1.31
TY2A-LR1P0C2J4 GTS1YGL181W 1191 nt6.87□□□□□ -1.31
TY2A-LR1P0C2J4 YBL111CYBL111C 2004 nt6.86□□□□□ -1.31
TY2A-LR1P0C2J4 SPE4YLR146C 903 nt6.86□□□□□ -1.31
TY2A-LR1P0C2J4 YNL067W-AYNL067W-A 147 nt6.86□□□□□ -1.31
TY2A-LR1P0C2J4 STF1YDL130W-A 261 nt6.85□□□□□ -1.31
TY2A-LR1P0C2J4 SHO1YER118C 1104 nt6.85□□□□□ -1.31
TY2A-LR1P0C2J4 CDC16YKL022C 2523 nt6.85□□□□□ -1.31
TY2A-LR1P0C2J4 HAL5YJL165C 2568 nt6.84□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms