Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.16■■□□□ 1.78
CD48P09326 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CD48P09326 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CD48P09326 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CD48P09326 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CD48P09326 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CD48P09326 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CD48P09326 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CD48P09326 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CD48P09326 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CD48P09326 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CD48P09326 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CD48P09326 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CD48P09326 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CD48P09326 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CD48P09326 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CD48P09326 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CD48P09326 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CD48P09326 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CD48P09326 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CD48P09326 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.1■■□□□ 1.77
CD48P09326 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
CD48P09326 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CD48P09326 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CD48P09326 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
CD48P09326 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CD48P09326 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.09■■□□□ 1.77
CD48P09326 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CD48P09326 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.08■■□□□ 1.77
CD48P09326 LINC01971-201ENST00000617888 1048 ntBASIC26.08■■□□□ 1.77
CD48P09326 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CD48P09326 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
CD48P09326 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CD48P09326 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CD48P09326 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.07■■□□□ 1.76
CD48P09326 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CD48P09326 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.07■■□□□ 1.76
CD48P09326 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CD48P09326 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.06■■□□□ 1.76
CD48P09326 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.06■■□□□ 1.76
CD48P09326 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.06■■□□□ 1.76
CD48P09326 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CD48P09326 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CD48P09326 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CD48P09326 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.06■■□□□ 1.76
CD48P09326 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.05■■□□□ 1.76
CD48P09326 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CD48P09326 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.05■■□□□ 1.76
CD48P09326 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CD48P09326 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CD48P09326 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CD48P09326 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CD48P09326 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.04■■□□□ 1.76
CD48P09326 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CD48P09326 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.04■■□□□ 1.76
CD48P09326 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CD48P09326 ZNRF2P2-203ENST00000454624 420 ntBASIC26.04■■□□□ 1.76
CD48P09326 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.04■■□□□ 1.76
CD48P09326 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CD48P09326 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CD48P09326 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CD48P09326 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.02■■□□□ 1.76
CD48P09326 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CD48P09326 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.02■■□□□ 1.76
CD48P09326 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.01■■□□□ 1.75
CD48P09326 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CD48P09326 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26■■□□□ 1.75
CD48P09326 DUX4L11-201ENST00000611504 1267 ntBASIC26■■□□□ 1.75
CD48P09326 DUX4L12-201ENST00000614593 1267 ntBASIC26■■□□□ 1.75
CD48P09326 DUX4L14-201ENST00000621227 1267 ntBASIC26■■□□□ 1.75
CD48P09326 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CD48P09326 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CD48P09326 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CD48P09326 DUX4L13-201ENST00000554103 1267 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L15-201ENST00000611059 1267 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L23-201ENST00000615195 1269 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L24-201ENST00000617576 1269 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L22-201ENST00000618238 1269 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L20-201ENST00000619712 1269 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L21-201ENST00000622058 1269 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L10-201ENST00000622460 1267 ntBASIC25.99■■□□□ 1.75
CD48P09326 DUX4L25-201ENST00000624915 1269 ntBASIC25.99■■□□□ 1.75
CD48P09326 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.98■■□□□ 1.75
CD48P09326 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.98■■□□□ 1.75
CD48P09326 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CD48P09326 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.98■■□□□ 1.75
CD48P09326 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
CD48P09326 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
CD48P09326 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CD48P09326 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CD48P09326 ABHD17AP4-201ENST00000411545 909 ntBASIC25.97■■□□□ 1.75
CD48P09326 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CD48P09326 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.97■■□□□ 1.75
CD48P09326 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.97■■□□□ 1.75
CD48P09326 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
CD48P09326 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
CD48P09326 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
CD48P09326 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.95■■□□□ 1.74
CD48P09326 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.95■■□□□ 1.74
CD48P09326 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms