RNA–Protein interactions for RNA: ENST00000642126.1

CASC19-282, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,206 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-282ENST00000642126 AEBP2Q6ZN18 517 aaPredicted RBP27.67■■■□□ 2.02
CASC19-282ENST00000642126 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
CASC19-282ENST00000642126 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
CASC19-282ENST00000642126 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
CASC19-282ENST00000642126 POTEDQ86YR6 584 aa22.61■■□□□ 1.21
CASC19-282ENST00000642126 FOXD1Q16676 465 aa22.25■■□□□ 1.15
CASC19-282ENST00000642126 MSH5O43196 834 aa21.09■□□□□ 0.97
CASC19-282ENST00000642126 PIAS4Q8N2W9 510 aaPredicted RBP20.43■□□□□ 0.86
CASC19-282ENST00000642126 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
CASC19-282ENST00000642126 ADRA2BP18089 450 aa19.83■□□□□ 0.77
CASC19-282ENST00000642126 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
CASC19-282ENST00000642126 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
CASC19-282ENST00000642126 MAPK8IP2Q13387 824 aaPredicted RBP18.59■□□□□ 0.57
CASC19-282ENST00000642126 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
CASC19-282ENST00000642126 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
CASC19-282ENST00000642126 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
CASC19-282ENST00000642126 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
CASC19-282ENST00000642126 C1QBPQ07021 282 aaKnown RBP17.58■□□□□ 0.4
CASC19-282ENST00000642126 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
CASC19-282ENST00000642126 POTEHQ6S545 545 aa17.45■□□□□ 0.38
CASC19-282ENST00000642126 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
CASC19-282ENST00000642126 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
CASC19-282ENST00000642126 PPP4R3CPQ6ZMV5 832 aa16.98■□□□□ 0.31
CASC19-282ENST00000642126 CNKSR2Q8WXI2 1034 aa16.86■□□□□ 0.29
CASC19-282ENST00000642126 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.56■□□□□ 0.24
CASC19-282ENST00000642126 DSG3P32926 999 aa16.48■□□□□ 0.23
CASC19-282ENST00000642126 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
CASC19-282ENST00000642126 CAPN15O75808 1086 aa16.24■□□□□ 0.19
CASC19-282ENST00000642126 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
CASC19-282ENST00000642126 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
CASC19-282ENST00000642126 ABCB7O75027 752 aa15.83■□□□□ 0.12
CASC19-282ENST00000642126 SP7Q8TDD2 431 aaPredicted RBP15.82■□□□□ 0.12
CASC19-282ENST00000642126 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
CASC19-282ENST00000642126 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
CASC19-282ENST00000642126 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
CASC19-282ENST00000642126 RBM42Q9BTD8 480 aaKnown RBP15.61■□□□□ 0.09
CASC19-282ENST00000642126 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
CASC19-282ENST00000642126 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
CASC19-282ENST00000642126 APLP2Q06481 763 aa15.39■□□□□ 0.05
CASC19-282ENST00000642126 PIP4P2Q8N4L2 257 aa15.22■□□□□ 0.03
CASC19-282ENST00000642126 HAX1O00165 279 aa15.19■□□□□ 0.02
CASC19-282ENST00000642126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
CASC19-282ENST00000642126 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
CASC19-282ENST00000642126 EVX2Q03828 476 aa15.1■□□□□ 0.01
CASC19-282ENST00000642126 POLA2Q14181 598 aa15.08■□□□□ 0
CASC19-282ENST00000642126 SAMD1Q6SPF0 538 aaPredicted RBP15.07■□□□□ 0
CASC19-282ENST00000642126 AKT1S1Q96B36 256 aa15.07■□□□□ 0
CASC19-282ENST00000642126 REM2Q8IYK8 340 aaPredicted RBP14.99□□□□□ -0.01
CASC19-282ENST00000642126 FXR2P51116 673 aaKnown RBP eCLIP14.96□□□□□ -0.01
CASC19-282ENST00000642126 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
CASC19-282ENST00000642126 LHX8Q68G74 356 aa14.83□□□□□ -0.04
CASC19-282ENST00000642126 PLSCR2Q9NRY7 297 aa14.79□□□□□ -0.04
CASC19-282ENST00000642126 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
CASC19-282ENST00000642126 GABBR2O75899 941 aa14.58□□□□□ -0.08
CASC19-282ENST00000642126 MYCNP04198 464 aaPredicted RBP14.53□□□□□ -0.08
CASC19-282ENST00000642126 KCNA4P22459 653 aa14.53□□□□□ -0.08
CASC19-282ENST00000642126 ZBTB12Q9Y330 459 aaPredicted RBP14.53□□□□□ -0.08
CASC19-282ENST00000642126 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.09
CASC19-282ENST00000642126 ATF5Q9Y2D1 282 aaPredicted RBP14.47□□□□□ -0.09
CASC19-282ENST00000642126 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
CASC19-282ENST00000642126 POTEIP0CG38 1075 aa14.36□□□□□ -0.11
CASC19-282ENST00000642126 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
CASC19-282ENST00000642126 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
CASC19-282ENST00000642126 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
CASC19-282ENST00000642126 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
CASC19-282ENST00000642126 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
CASC19-282ENST00000642126 SPDYE1Q8NFV5 336 aaPredicted RBP14.08□□□□□ -0.16
CASC19-282ENST00000642126 POTEMA6NI47 508 aa14.02□□□□□ -0.17
CASC19-282ENST00000642126 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
CASC19-282ENST00000642126 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
CASC19-282ENST00000642126 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
CASC19-282ENST00000642126 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
CASC19-282ENST00000642126 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
CASC19-282ENST00000642126 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
CASC19-282ENST00000642126 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
CASC19-282ENST00000642126 CLCN6P51797 869 aa13.79□□□□□ -0.2
CASC19-282ENST00000642126 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
CASC19-282ENST00000642126 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
CASC19-282ENST00000642126 FBLN2P98095 1184 aa13.74□□□□□ -0.21
CASC19-282ENST00000642126 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
CASC19-282ENST00000642126 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
CASC19-282ENST00000642126 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
CASC19-282ENST00000642126 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
CASC19-282ENST00000642126 NISCHQ9Y2I1 1504 aa13.63□□□□□ -0.23
CASC19-282ENST00000642126 GALR2O43603 387 aaPredicted RBP13.62□□□□□ -0.23
CASC19-282ENST00000642126 LCE2DQ5TA82 110 aaPredicted RBP13.62□□□□□ -0.23
CASC19-282ENST00000642126 PABPN1Q86U42 306 aaKnown RBP eCLIP13.54□□□□□ -0.24
CASC19-282ENST00000642126 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
CASC19-282ENST00000642126 PELP1Q8IZL8 1130 aaKnown RBP13.51□□□□□ -0.25
CASC19-282ENST00000642126 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
CASC19-282ENST00000642126 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
CASC19-282ENST00000642126 ZBTB22O15209 634 aa13.41□□□□□ -0.26
CASC19-282ENST00000642126 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
CASC19-282ENST00000642126 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
CASC19-282ENST00000642126 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
CASC19-282ENST00000642126 METRNQ9UJH8 293 aa13.3□□□□□ -0.28
CASC19-282ENST00000642126 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
CASC19-282ENST00000642126 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
CASC19-282ENST00000642126 ASTLQ6HA08 431 aaPredicted RBP13.21□□□□□ -0.29
CASC19-282ENST00000642126 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms