RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
CASC19-205ENST00000641013 CHIC1Q5VXU3 224 aa19.24■□□□□ 0.67
CASC19-205ENST00000641013 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
CASC19-205ENST00000641013 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
CASC19-205ENST00000641013 FOXD1Q16676 465 aa16.21■□□□□ 0.19
CASC19-205ENST00000641013 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
CASC19-205ENST00000641013 MSH5O43196 834 aa15.27■□□□□ 0.04
CASC19-205ENST00000641013 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
CASC19-205ENST00000641013 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
CASC19-205ENST00000641013 PPP6R1Q9UPN7 881 aa15.07■□□□□ 0
CASC19-205ENST00000641013 ADRA2BP18089 450 aa15.04■□□□□ -0
CASC19-205ENST00000641013 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
CASC19-205ENST00000641013 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
CASC19-205ENST00000641013 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
CASC19-205ENST00000641013 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
CASC19-205ENST00000641013 PELP1Q8IZL8 1130 aaKnown RBP13.65□□□□□ -0.22
CASC19-205ENST00000641013 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
CASC19-205ENST00000641013 MYT1Q01538 1121 aa13.4□□□□□ -0.26
CASC19-205ENST00000641013 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
CASC19-205ENST00000641013 CNKSR2Q8WXI2 1034 aa13.23□□□□□ -0.29
CASC19-205ENST00000641013 HRCP23327 699 aa13.22□□□□□ -0.29
CASC19-205ENST00000641013 HOXD11P31277 338 aaPredicted RBP13.22□□□□□ -0.29
CASC19-205ENST00000641013 CACNB1Q02641 598 aaPredicted RBP13.2□□□□□ -0.3
CASC19-205ENST00000641013 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
CASC19-205ENST00000641013 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
CASC19-205ENST00000641013 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
CASC19-205ENST00000641013 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
CASC19-205ENST00000641013 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
CASC19-205ENST00000641013 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.37
CASC19-205ENST00000641013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
CASC19-205ENST00000641013 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
CASC19-205ENST00000641013 ZEB1P37275 1124 aaPredicted RBP12.63□□□□□ -0.39
CASC19-205ENST00000641013 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
CASC19-205ENST00000641013 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
CASC19-205ENST00000641013 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
CASC19-205ENST00000641013 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
CASC19-205ENST00000641013 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
CASC19-205ENST00000641013 KCNA4P22459 653 aa12.34□□□□□ -0.43
CASC19-205ENST00000641013 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
CASC19-205ENST00000641013 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
CASC19-205ENST00000641013 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
CASC19-205ENST00000641013 CAPN15O75808 1086 aa12.23□□□□□ -0.45
CASC19-205ENST00000641013 CENPBP07199 599 aaPredicted RBP12.22□□□□□ -0.45
CASC19-205ENST00000641013 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
CASC19-205ENST00000641013 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
CASC19-205ENST00000641013 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
CASC19-205ENST00000641013 DSG3P32926 999 aa12.11□□□□□ -0.47
CASC19-205ENST00000641013 APLP2Q06481 763 aa12.08□□□□□ -0.48
CASC19-205ENST00000641013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.03□□□□□ -0.48
CASC19-205ENST00000641013 HNRNPUL2Q1KMD3 747 aaKnown RBP12.03□□□□□ -0.48
CASC19-205ENST00000641013 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
CASC19-205ENST00000641013 GTF3C3Q9Y5Q9 886 aa12.03□□□□□ -0.48
CASC19-205ENST00000641013 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
CASC19-205ENST00000641013 CLSPNQ9HAW4 1339 aa11.99□□□□□ -0.49
CASC19-205ENST00000641013 ZNF219Q9P2Y4 722 aaPredicted RBP11.97□□□□□ -0.49
CASC19-205ENST00000641013 SAMD1Q6SPF0 538 aaPredicted RBP11.94□□□□□ -0.5
CASC19-205ENST00000641013 SHROOM4Q9ULL8 1493 aa11.93□□□□□ -0.5
CASC19-205ENST00000641013 ABCB7O75027 752 aa11.9□□□□□ -0.5
CASC19-205ENST00000641013 ZCCHC6Q5VYS8 1495 aaKnown RBP11.88□□□□□ -0.51
CASC19-205ENST00000641013 BCL11AQ9H165 835 aa11.86□□□□□ -0.51
CASC19-205ENST00000641013 DIEXFQ68CQ4 756 aaKnown RBP11.84□□□□□ -0.51
CASC19-205ENST00000641013 ERICH6Q7L0X2 663 aa11.83□□□□□ -0.52
CASC19-205ENST00000641013 ANP32EQ9BTT0 268 aa11.8□□□□□ -0.52
CASC19-205ENST00000641013 POTEHQ6S545 545 aa11.78□□□□□ -0.52
CASC19-205ENST00000641013 LOC105371045A0A1W2PR82 267 aa11.77□□□□□ -0.52
CASC19-205ENST00000641013 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
CASC19-205ENST00000641013 TRIM41Q8WV44 630 aa11.73□□□□□ -0.53
CASC19-205ENST00000641013 SLC4A1APQ9BWU0 796 aaKnown RBP11.68□□□□□ -0.54
CASC19-205ENST00000641013 POLA2Q14181 598 aa11.66□□□□□ -0.54
CASC19-205ENST00000641013 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
CASC19-205ENST00000641013 ZNF316A6NFI3 1004 aaPredicted RBP11.63□□□□□ -0.55
CASC19-205ENST00000641013 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
CASC19-205ENST00000641013 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
CASC19-205ENST00000641013 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
CASC19-205ENST00000641013 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
CASC19-205ENST00000641013 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
CASC19-205ENST00000641013 TSHZ2Q9NRE2 1034 aa11.49□□□□□ -0.57
CASC19-205ENST00000641013 CSRNP3Q8WYN3 585 aa11.46□□□□□ -0.57
CASC19-205ENST00000641013 SUPT16HQ9Y5B9 1047 aaKnown RBP11.45□□□□□ -0.58
CASC19-205ENST00000641013 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
CASC19-205ENST00000641013 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
CASC19-205ENST00000641013 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
CASC19-205ENST00000641013 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
CASC19-205ENST00000641013 MIER1Q8N108 512 aa11.38□□□□□ -0.59
CASC19-205ENST00000641013 YTHDC1Q96MU7 727 aaKnown RBP11.35□□□□□ -0.59
CASC19-205ENST00000641013 ERICH6BQ5W0A0 696 aa11.32□□□□□ -0.6
CASC19-205ENST00000641013 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
CASC19-205ENST00000641013 ABCC9O60706 1549 aa11.32□□□□□ -0.6
CASC19-205ENST00000641013 ZBTB22O15209 634 aa11.29□□□□□ -0.6
CASC19-205ENST00000641013 RB1CC1Q8TDY2 1594 aa11.27□□□□□ -0.61
CASC19-205ENST00000641013 FANCIQ9NVI1 1328 aa11.26□□□□□ -0.61
CASC19-205ENST00000641013 ATXN8OSP0DMR3 200 aa11.25□□□□□ -0.61
CASC19-205ENST00000641013 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
CASC19-205ENST00000641013 RBM19Q9Y4C8 960 aaKnown RBP11.21□□□□□ -0.61
CASC19-205ENST00000641013 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
CASC19-205ENST00000641013 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
CASC19-205ENST00000641013 TNIKQ9UKE5 1360 aa11.13□□□□□ -0.63
CASC19-205ENST00000641013 NEFLP07196 543 aa11.13□□□□□ -0.63
CASC19-205ENST00000641013 FBLN2P98095 1184 aa11.12□□□□□ -0.63
CASC19-205ENST00000641013 EEA1Q15075 1411 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms