RNA–Protein interactions for RNA: ENST00000640813.1

HMBS-226, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-226ENST00000640813 NISCHQ9Y2I1 1504 aa45.81■■■■■ 4.92
HMBS-226ENST00000640813 CCDC180Q9P1Z9 1646 aa40.82■■■■■ 4.12
HMBS-226ENST00000640813 ABCC9O60706 1549 aa40.25■■■■■ 4.03
HMBS-226ENST00000640813 RB1CC1Q8TDY2 1594 aa38.63■■■■□ 3.77
HMBS-226ENST00000640813 NACADO15069 1562 aa38.54■■■■□ 3.76
HMBS-226ENST00000640813 DCAF8L2P0C7V8 631 aa38.43■■■■□ 3.74
HMBS-226ENST00000640813 MYO15BQ96JP2 1530 aa38.27■■■■□ 3.72
HMBS-226ENST00000640813 ZCCHC6Q5VYS8 1495 aaKnown RBP38.05■■■■□ 3.68
HMBS-226ENST00000640813 DCAF1Q9Y4B6 1507 aa37.95■■■■□ 3.67
HMBS-226ENST00000640813 PABPN1Q86U42 306 aaKnown RBP eCLIP37.61■■■■□ 3.61
HMBS-226ENST00000640813 UNC13AQ9UPW8 1703 aa37.58■■■■□ 3.61
HMBS-226ENST00000640813 BICRAQ9NZM4 1560 aa37.42■■■■□ 3.58
HMBS-226ENST00000640813 DNAJC5BQ9UF47 199 aa37.32■■■■□ 3.56
HMBS-226ENST00000640813 SCRIBQ14160 1630 aa37.14■■■■□ 3.54
HMBS-226ENST00000640813 SHROOM4Q9ULL8 1493 aa37.13■■■■□ 3.54
HMBS-226ENST00000640813 EIF4G1Q04637 1599 aaKnown RBP36.47■■■■□ 3.43
HMBS-226ENST00000640813 CC2D2AQ9P2K1 1620 aa36.38■■■■□ 3.41
HMBS-226ENST00000640813 CECR2Q9BXF3 1484 aa36.26■■■■□ 3.4
HMBS-226ENST00000640813 NCAPD3P42695 1498 aa35.6■■■■□ 3.29
HMBS-226ENST00000640813 SMARCA4P51532 1647 aa35.55■■■■□ 3.28
HMBS-226ENST00000640813 BAZ1AQ9NRL2 1556 aaPredicted RBP35.52■■■■□ 3.28
HMBS-226ENST00000640813 ATAD2BQ9ULI0 1458 aa35.52■■■■□ 3.28
HMBS-226ENST00000640813 SMARCA2P51531 1590 aa35.47■■■■□ 3.27
HMBS-226ENST00000640813 HMGXB3Q12766 1538 aa35.32■■■■□ 3.25
HMBS-226ENST00000640813 PEG3Q9GZU2 1588 aa35.28■■■■□ 3.24
HMBS-226ENST00000640813 MROH2BQ7Z745 1585 aa35.25■■■■□ 3.23
HMBS-226ENST00000640813 BAZ1BQ9UIG0 1483 aaKnown RBP35.17■■■■□ 3.22
HMBS-226ENST00000640813 WIZO95785 1651 aa34.79■■■■□ 3.16
HMBS-226ENST00000640813 RSF1Q96T23 1441 aaPredicted RBP34.78■■■■□ 3.16
HMBS-226ENST00000640813 ERCC6Q03468 1493 aa34.76■■■■□ 3.15
HMBS-226ENST00000640813 NESP48681 1621 aa34.71■■■■□ 3.15
HMBS-226ENST00000640813 LAMC3Q9Y6N6 1575 aa34.65■■■■□ 3.14
HMBS-226ENST00000640813 CUX2O14529 1486 aa34.57■■■■□ 3.12
HMBS-226ENST00000640813 CADPSQ9ULU8 1353 aa34.55■■■■□ 3.12
HMBS-226ENST00000640813 PDS5BQ9NTI5 1447 aa34.5■■■■□ 3.11
HMBS-226ENST00000640813 TOP2AP11388 1531 aaKnown RBP34.47■■■■□ 3.11
HMBS-226ENST00000640813 CFTRP13569 1480 aa34.25■■■■□ 3.07
HMBS-226ENST00000640813 THOC2Q8NI27 1593 aaKnown RBP34.23■■■■□ 3.07
HMBS-226ENST00000640813 KIF21AQ7Z4S6 1674 aa34.22■■■■□ 3.07
HMBS-226ENST00000640813 CCDC88BA6NC98 1476 aa34.1■■■■□ 3.05
HMBS-226ENST00000640813 MRC2Q9UBG0 1479 aa34.09■■■■□ 3.05
HMBS-226ENST00000640813 FANCD2Q9BXW9 1451 aa34.08■■■■□ 3.05
HMBS-226ENST00000640813 CEP164Q9UPV0 1460 aa34.07■■■■□ 3.04
HMBS-226ENST00000640813 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
HMBS-226ENST00000640813 WDR62O43379 1518 aa33.97■■■■□ 3.03
HMBS-226ENST00000640813 PRDM2Q13029 1718 aa33.79■■■■□ 3
HMBS-226ENST00000640813 URB2Q14146 1524 aaKnown RBP33.73■■■□□ 2.99
HMBS-226ENST00000640813 SUPT5HO00267 1087 aaKnown RBP33.63■■■□□ 2.97
HMBS-226ENST00000640813 ABCC8Q09428 1581 aa33.58■■■□□ 2.97
HMBS-226ENST00000640813 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
HMBS-226ENST00000640813 IFT140Q96RY7 1462 aa33.41■■■□□ 2.94
HMBS-226ENST00000640813 DNMBPQ6XZF7 1577 aa33.4■■■□□ 2.94
HMBS-226ENST00000640813 ZNF608Q9ULD9 1512 aaPredicted RBP33.21■■■□□ 2.91
HMBS-226ENST00000640813 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
HMBS-226ENST00000640813 OSCARQ8IYS5 282 aa33.16■■■□□ 2.9
HMBS-226ENST00000640813 TARBP1Q13395 1621 aaKnown RBP33.12■■■□□ 2.89
HMBS-226ENST00000640813 SOGA1O94964 1423 aa33.11■■■□□ 2.89
HMBS-226ENST00000640813 CUX1P39880 1505 aa33.07■■■□□ 2.89
HMBS-226ENST00000640813 FGD5Q6ZNL6 1462 aa33.03■■■□□ 2.88
HMBS-226ENST00000640813 RAD54L2Q9Y4B4 1467 aa33.02■■■□□ 2.88
HMBS-226ENST00000640813 AQRO60306 1485 aaKnown RBP eCLIP33.01■■■□□ 2.888e-8■■■■■ 27.7
HMBS-226ENST00000640813 EIF4G3O43432 1585 aaKnown RBP33■■■□□ 2.87
HMBS-226ENST00000640813 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
HMBS-226ENST00000640813 WDR97A6NE52 1622 aa32.91■■■□□ 2.86
HMBS-226ENST00000640813 WRNQ14191 1432 aaPredicted RBP eCLIP32.8■■■□□ 2.84
HMBS-226ENST00000640813 ABCA10Q8WWZ4 1543 aa32.75■■■□□ 2.83
HMBS-226ENST00000640813 GRIN2BQ13224 1484 aa32.74■■■□□ 2.83
HMBS-226ENST00000640813 FBLN2P98095 1184 aa32.72■■■□□ 2.83
HMBS-226ENST00000640813 TOP2BQ02880 1626 aa32.72■■■□□ 2.83
HMBS-226ENST00000640813 MAGI1Q96QZ7 1491 aaPredicted RBP32.69■■■□□ 2.82
HMBS-226ENST00000640813 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
HMBS-226ENST00000640813 GAPVD1Q14C86 1478 aa32.68■■■□□ 2.82
HMBS-226ENST00000640813 SNAPC4Q5SXM2 1469 aa32.67■■■□□ 2.82
HMBS-226ENST00000640813 CHMP7Q8WUX9 453 aaPredicted RBP32.64■■■□□ 2.82
HMBS-226ENST00000640813 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
HMBS-226ENST00000640813 CHD1O14646 1710 aa32.63■■■□□ 2.81
HMBS-226ENST00000640813 TRIM41Q8WV44 630 aa32.59■■■□□ 2.81
HMBS-226ENST00000640813 ABCA5Q8WWZ7 1642 aa32.56■■■□□ 2.8
HMBS-226ENST00000640813 SYNJ2O15056 1496 aa32.55■■■□□ 2.8
HMBS-226ENST00000640813 PBRM1Q86U86 1689 aa32.49■■■□□ 2.79
HMBS-226ENST00000640813 ARHGEF11O15085 1522 aa32.47■■■□□ 2.79
HMBS-226ENST00000640813 RIMBP3CA6NJZ7 1639 aa32.47■■■□□ 2.79
HMBS-226ENST00000640813 RIMBP3BA6NNM3 1639 aa32.47■■■□□ 2.79
HMBS-226ENST00000640813 RIMBP3Q9UFD9 1639 aa32.47■■■□□ 2.79
HMBS-226ENST00000640813 ERICH3Q5RHP9 1530 aa32.36■■■□□ 2.77
HMBS-226ENST00000640813 CLASP1Q7Z460 1538 aa32.36■■■□□ 2.77
HMBS-226ENST00000640813 FHAD1B1AJZ9 1412 aa32.33■■■□□ 2.77
HMBS-226ENST00000640813 CYB5RLQ6IPT4 315 aa32.28■■■□□ 2.76
HMBS-226ENST00000640813 GRIN2AQ12879 1464 aa32.28■■■□□ 2.76
HMBS-226ENST00000640813 ADAMTS12P58397 1594 aa32.26■■■□□ 2.75
HMBS-226ENST00000640813 NUP160Q12769 1436 aa32.18■■■□□ 2.74
HMBS-226ENST00000640813 KIF27Q86VH2 1401 aa32.18■■■□□ 2.74
HMBS-226ENST00000640813 ARAP1Q96P48 1450 aa32.18■■■□□ 2.74
HMBS-226ENST00000640813 IGF1RP08069 1367 aa32.11■■■□□ 2.73
HMBS-226ENST00000640813 CEP170Q5SW79 1584 aa32.07■■■□□ 2.72
HMBS-226ENST00000640813 CUL7Q14999 1698 aa31.94■■■□□ 2.7
HMBS-226ENST00000640813 JPH4Q96JJ6 628 aa31.93■■■□□ 2.7
HMBS-226ENST00000640813 SHROOM2Q13796 1616 aa31.92■■■□□ 2.7
HMBS-226ENST00000640813 CARMIL1Q5VZK9 1371 aa31.91■■■□□ 2.7
HMBS-226ENST00000640813 ERCC6L2Q5T890 1561 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms