RNA–Protein interactions for RNA: ENST00000640641.1

FAM238C-205, Transcript of family with sequence similarity 238 member C, humanhuman

BASIC

Gene FAM238C, Length 391 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-205ENST00000640641 NISCHQ9Y2I1 1504 aa21.61■■□□□ 1.05
FAM238C-205ENST00000640641 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
FAM238C-205ENST00000640641 ABCC9O60706 1549 aa18.95■□□□□ 0.62
FAM238C-205ENST00000640641 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
FAM238C-205ENST00000640641 RB1CC1Q8TDY2 1594 aa18.13■□□□□ 0.49
FAM238C-205ENST00000640641 NACADO15069 1562 aa18.1■□□□□ 0.49
FAM238C-205ENST00000640641 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
FAM238C-205ENST00000640641 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
FAM238C-205ENST00000640641 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
FAM238C-205ENST00000640641 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
FAM238C-205ENST00000640641 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
FAM238C-205ENST00000640641 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
FAM238C-205ENST00000640641 BICRAQ9NZM4 1560 aa17.6■□□□□ 0.41
FAM238C-205ENST00000640641 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
FAM238C-205ENST00000640641 SHROOM4Q9ULL8 1493 aa17.38■□□□□ 0.37
FAM238C-205ENST00000640641 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
FAM238C-205ENST00000640641 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
FAM238C-205ENST00000640641 CECR2Q9BXF3 1484 aa17.04■□□□□ 0.32
FAM238C-205ENST00000640641 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
FAM238C-205ENST00000640641 ATAD2BQ9ULI0 1458 aa16.74■□□□□ 0.27
FAM238C-205ENST00000640641 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
FAM238C-205ENST00000640641 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
FAM238C-205ENST00000640641 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
FAM238C-205ENST00000640641 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
FAM238C-205ENST00000640641 HMGXB3Q12766 1538 aa16.59■□□□□ 0.25
FAM238C-205ENST00000640641 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
FAM238C-205ENST00000640641 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
FAM238C-205ENST00000640641 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
FAM238C-205ENST00000640641 WIZO95785 1651 aa16.43■□□□□ 0.22
FAM238C-205ENST00000640641 NESP48681 1621 aa16.37■□□□□ 0.21
FAM238C-205ENST00000640641 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
FAM238C-205ENST00000640641 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
FAM238C-205ENST00000640641 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
FAM238C-205ENST00000640641 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
FAM238C-205ENST00000640641 PDS5BQ9NTI5 1447 aa16.23■□□□□ 0.19
FAM238C-205ENST00000640641 CUX2O14529 1486 aa16.18■□□□□ 0.18
FAM238C-205ENST00000640641 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
FAM238C-205ENST00000640641 CFTRP13569 1480 aa16.14■□□□□ 0.17
FAM238C-205ENST00000640641 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
FAM238C-205ENST00000640641 FANCD2Q9BXW9 1451 aa16.06■□□□□ 0.16
FAM238C-205ENST00000640641 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
FAM238C-205ENST00000640641 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
FAM238C-205ENST00000640641 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
FAM238C-205ENST00000640641 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
FAM238C-205ENST00000640641 WDR62O43379 1518 aa15.94■□□□□ 0.14
FAM238C-205ENST00000640641 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
FAM238C-205ENST00000640641 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
FAM238C-205ENST00000640641 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
FAM238C-205ENST00000640641 ABCC8Q09428 1581 aa15.79■□□□□ 0.12
FAM238C-205ENST00000640641 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
FAM238C-205ENST00000640641 IFT140Q96RY7 1462 aa15.71■□□□□ 0.11
FAM238C-205ENST00000640641 DNMBPQ6XZF7 1577 aa15.71■□□□□ 0.11
FAM238C-205ENST00000640641 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
FAM238C-205ENST00000640641 SOGA1O94964 1423 aa15.64■□□□□ 0.09
FAM238C-205ENST00000640641 POLA1P09884 1462 aaPredicted RBP15.64■□□□□ 0.09
FAM238C-205ENST00000640641 CUX1P39880 1505 aa15.63■□□□□ 0.09
FAM238C-205ENST00000640641 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
FAM238C-205ENST00000640641 OSCARQ8IYS5 282 aa15.61■□□□□ 0.09
FAM238C-205ENST00000640641 AQRO60306 1485 aaKnown RBP eCLIP15.59■□□□□ 0.09
FAM238C-205ENST00000640641 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.09
FAM238C-205ENST00000640641 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
FAM238C-205ENST00000640641 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
FAM238C-205ENST00000640641 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.071e-323■■■■■ 232.4
FAM238C-205ENST00000640641 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
FAM238C-205ENST00000640641 FBLN2P98095 1184 aa15.47■□□□□ 0.07
FAM238C-205ENST00000640641 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
FAM238C-205ENST00000640641 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
FAM238C-205ENST00000640641 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
FAM238C-205ENST00000640641 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
FAM238C-205ENST00000640641 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
FAM238C-205ENST00000640641 GAPVD1Q14C86 1478 aa15.41■□□□□ 0.06
FAM238C-205ENST00000640641 CHMP7Q8WUX9 453 aaPredicted RBP15.41■□□□□ 0.06
FAM238C-205ENST00000640641 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
FAM238C-205ENST00000640641 SNAPC4Q5SXM2 1469 aa15.39■□□□□ 0.05
FAM238C-205ENST00000640641 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
FAM238C-205ENST00000640641 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
FAM238C-205ENST00000640641 SYNJ2O15056 1496 aa15.32■□□□□ 0.04
FAM238C-205ENST00000640641 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
FAM238C-205ENST00000640641 CHD1O14646 1710 aa15.31■□□□□ 0.04
FAM238C-205ENST00000640641 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
FAM238C-205ENST00000640641 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
FAM238C-205ENST00000640641 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
FAM238C-205ENST00000640641 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
FAM238C-205ENST00000640641 RIMBP3CA6NJZ7 1639 aa15.23■□□□□ 0.03
FAM238C-205ENST00000640641 RIMBP3BA6NNM3 1639 aa15.23■□□□□ 0.03
FAM238C-205ENST00000640641 RIMBP3Q9UFD9 1639 aa15.23■□□□□ 0.03
FAM238C-205ENST00000640641 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
FAM238C-205ENST00000640641 IGF1RP08069 1367 aa15.22■□□□□ 0.03
FAM238C-205ENST00000640641 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
FAM238C-205ENST00000640641 CLASP1Q7Z460 1538 aa15.2■□□□□ 0.02
FAM238C-205ENST00000640641 GRIN2AQ12879 1464 aa15.2■□□□□ 0.02
FAM238C-205ENST00000640641 ADAMTS12P58397 1594 aa15.18■□□□□ 0.02
FAM238C-205ENST00000640641 NUP160Q12769 1436 aa15.16■□□□□ 0.02
FAM238C-205ENST00000640641 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
FAM238C-205ENST00000640641 CEP170Q5SW79 1584 aa15.11■□□□□ 0.01
FAM238C-205ENST00000640641 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
FAM238C-205ENST00000640641 JPH4Q96JJ6 628 aa15.1■□□□□ 0.01
FAM238C-205ENST00000640641 RUSC2Q8N2Y8 1516 aa15.06■□□□□ 0
FAM238C-205ENST00000640641 CUL7Q14999 1698 aa15.02□□□□□ -0.01
FAM238C-205ENST00000640641 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms