RNA–Protein interactions for RNA: ENST00000640641.1

FAM238C-205, Transcript of family with sequence similarity 238 member C, humanhuman

BASIC

Gene FAM238C, Length 391 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-205ENST00000640641 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.071e-323■■■■■ 232.4
FAM238C-205ENST00000640641 NSUN2Q08J23 767 aaKnown RBP eCLIP9□□□□□ -0.972e-142■■■■■ 141.9
FAM238C-205ENST00000640641 PABPC4Q13310 644 aaKnown RBP eCLIP10.64□□□□□ -0.719e-33■■■■■ 105.6
FAM238C-205ENST00000640641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.91□□□□□ -0.981e-15■■■■■ 95.8
FAM238C-205ENST00000640641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.78□□□□□ -0.684e-19■■■■■ 90.5
FAM238C-205ENST00000640641 DDX3XO00571 662 aaKnown RBP eCLIP9.14□□□□□ -0.951e-7■■■■■ 82.6
FAM238C-205ENST00000640641 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.2□□□□□ -1.13e-10■■■■■ 67
FAM238C-205ENST00000640641 SMNDC1O75940 238 aaKnown RBP eCLIP7.95□□□□□ -1.146e-30■■■■■ 55.8
FAM238C-205ENST00000640641 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.34□□□□□ -1.074e-35■■■■■ 54.7
FAM238C-205ENST00000640641 RPS11P62280 158 aaKnown RBP eCLIP7.25□□□□□ -1.253e-19■■■■■ 52.8
FAM238C-205ENST00000640641 AARSP49588 968 aaKnown RBP eCLIP9.62□□□□□ -0.878e-6■■■■■ 52.4
FAM238C-205ENST00000640641 FMR1Q06787 632 aaKnown RBP eCLIP11.1□□□□□ -0.631e-12■■■■■ 49.3
FAM238C-205ENST00000640641 NCBP2P52298 156 aaKnown RBP eCLIP8.16□□□□□ -1.12e-10■■■■■ 48.2
FAM238C-205ENST00000640641 SF3A3Q12874 501 aaKnown RBP eCLIP7.91□□□□□ -1.146e-22■■■■■ 46.9
FAM238C-205ENST00000640641 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.6□□□□□ -0.712e-14■■■■■ 37.5
FAM238C-205ENST00000640641 SLBPQ14493 270 aaKnown RBP eCLIP8.39□□□□□ -1.072e-7■■■■■ 36.7
FAM238C-205ENST00000640641 YWHAGP61981 247 aaKnown RBP eCLIP9.33□□□□□ -0.928e-48■■■■■ 33.3
FAM238C-205ENST00000640641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.68□□□□□ -0.862e-9■■■■□ 21
FAM238C-205ENST00000640641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.21□□□□□ -0.941e-67■■■■□ 20.7
FAM238C-205ENST00000640641 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.829e-20■■■■□ 20
FAM238C-205ENST00000640641 LSM11P83369 360 aaKnown RBP eCLIP7.75□□□□□ -1.175e-12■■■□□ 18.9
FAM238C-205ENST00000640641 WDR43Q15061 677 aaKnown RBP eCLIP11.74□□□□□ -0.539e-16■■■□□ 18.7
FAM238C-205ENST00000640641 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.942e-6■■■□□ 16.3
FAM238C-205ENST00000640641 GPKOWQ92917 476 aaPredicted RBP eCLIP10.22□□□□□ -0.772e-22■■■□□ 15.9
FAM238C-205ENST00000640641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.47□□□□□ -0.891e-6■■■□□ 15.4
FAM238C-205ENST00000640641 RBM22Q9NW64 420 aaKnown RBP eCLIP8.94□□□□□ -0.981e-12■■■□□ 15.1
FAM238C-205ENST00000640641 GTF2F1P35269 517 aaKnown RBP eCLIP9.79□□□□□ -0.841e-10■■■□□ 15.1
FAM238C-205ENST00000640641 EIF4G2P78344 907 aaKnown RBP eCLIP12.4□□□□□ -0.427e-9■■■□□ 14.9
FAM238C-205ENST00000640641 TROVE2P10155 538 aaKnown RBP eCLIP7.92□□□□□ -1.144e-14■■□□□ 13.1
FAM238C-205ENST00000640641 NPM1P06748 294 aaKnown RBP eCLIP14.82□□□□□ -0.049e-6■□□□□ 9
FAM238C-205ENST00000640641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.59□□□□□ -0.876e-7■□□□□ 8.6
Retrieved 31 of 31 RNA–protein pairs in 4.4 ms