RNA–Protein interactions for RNA: ENST00000640626.1

KCNMA1-286, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-286ENST00000640626 NISCHQ9Y2I1 1504 aa19.4■□□□□ 0.7
KCNMA1-286ENST00000640626 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
KCNMA1-286ENST00000640626 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
KCNMA1-286ENST00000640626 DCAF1Q9Y4B6 1507 aa16.58■□□□□ 0.24
KCNMA1-286ENST00000640626 ZCCHC6Q5VYS8 1495 aaKnown RBP16.35■□□□□ 0.21
KCNMA1-286ENST00000640626 NACADO15069 1562 aa16.21■□□□□ 0.19
KCNMA1-286ENST00000640626 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
KCNMA1-286ENST00000640626 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
KCNMA1-286ENST00000640626 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
KCNMA1-286ENST00000640626 ABCC9O60706 1549 aa15.77■□□□□ 0.12
KCNMA1-286ENST00000640626 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
KCNMA1-286ENST00000640626 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
KCNMA1-286ENST00000640626 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
KCNMA1-286ENST00000640626 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
KCNMA1-286ENST00000640626 SMARCA4P51532 1647 aa15.04■□□□□ -0
KCNMA1-286ENST00000640626 SMARCA2P51531 1590 aa15.02□□□□□ -0.01
KCNMA1-286ENST00000640626 HMGXB3Q12766 1538 aa14.96□□□□□ -0.01
KCNMA1-286ENST00000640626 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
KCNMA1-286ENST00000640626 NCAPD3P42695 1498 aa14.81□□□□□ -0.04
KCNMA1-286ENST00000640626 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
KCNMA1-286ENST00000640626 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
KCNMA1-286ENST00000640626 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
KCNMA1-286ENST00000640626 CC2D2AQ9P2K1 1620 aa14.73□□□□□ -0.05
KCNMA1-286ENST00000640626 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
KCNMA1-286ENST00000640626 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.06
KCNMA1-286ENST00000640626 ATAD2BQ9ULI0 1458 aa14.7□□□□□ -0.06
KCNMA1-286ENST00000640626 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
KCNMA1-286ENST00000640626 WIZO95785 1651 aa14.64□□□□□ -0.07
KCNMA1-286ENST00000640626 BAZ1BQ9UIG0 1483 aaKnown RBP14.48□□□□□ -0.09
KCNMA1-286ENST00000640626 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.1
KCNMA1-286ENST00000640626 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
KCNMA1-286ENST00000640626 CFTRP13569 1480 aa14.33□□□□□ -0.12
KCNMA1-286ENST00000640626 CCDC88BA6NC98 1476 aa14.29□□□□□ -0.12
KCNMA1-286ENST00000640626 WDR97A6NE52 1622 aa14.27□□□□□ -0.12
KCNMA1-286ENST00000640626 BIVM-ERCC5R4GMW8 1640 aa14.24□□□□□ -0.13
KCNMA1-286ENST00000640626 THOC2Q8NI27 1593 aaKnown RBP14.14□□□□□ -0.15
KCNMA1-286ENST00000640626 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
KCNMA1-286ENST00000640626 CADPSQ9ULU8 1353 aa14.13□□□□□ -0.15
KCNMA1-286ENST00000640626 WDR62O43379 1518 aa14.11□□□□□ -0.15
KCNMA1-286ENST00000640626 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
KCNMA1-286ENST00000640626 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
KCNMA1-286ENST00000640626 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
KCNMA1-286ENST00000640626 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
KCNMA1-286ENST00000640626 PDS5BQ9NTI5 1447 aa14.02□□□□□ -0.17
KCNMA1-286ENST00000640626 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
KCNMA1-286ENST00000640626 MRC2Q9UBG0 1479 aa13.95□□□□□ -0.18
KCNMA1-286ENST00000640626 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
KCNMA1-286ENST00000640626 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
KCNMA1-286ENST00000640626 CUX2O14529 1486 aa13.93□□□□□ -0.18
KCNMA1-286ENST00000640626 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
KCNMA1-286ENST00000640626 CUX1P39880 1505 aa13.89□□□□□ -0.19
KCNMA1-286ENST00000640626 SYNJ1O43426 1573 aa13.87□□□□□ -0.19
KCNMA1-286ENST00000640626 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
KCNMA1-286ENST00000640626 URB2Q14146 1524 aaKnown RBP13.86□□□□□ -0.19
KCNMA1-286ENST00000640626 TOPBP1Q92547 1522 aa13.86□□□□□ -0.19
KCNMA1-286ENST00000640626 NESP48681 1621 aa13.84□□□□□ -0.19
KCNMA1-286ENST00000640626 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
KCNMA1-286ENST00000640626 MYT1Q01538 1121 aa13.79□□□□□ -0.2
KCNMA1-286ENST00000640626 IFT140Q96RY7 1462 aa13.77□□□□□ -0.21
KCNMA1-286ENST00000640626 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
KCNMA1-286ENST00000640626 CUL7Q14999 1698 aa13.77□□□□□ -0.21
KCNMA1-286ENST00000640626 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
KCNMA1-286ENST00000640626 EEA1Q15075 1411 aa13.76□□□□□ -0.21
KCNMA1-286ENST00000640626 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
KCNMA1-286ENST00000640626 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
KCNMA1-286ENST00000640626 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
KCNMA1-286ENST00000640626 KIF21BO75037 1637 aa13.69□□□□□ -0.22
KCNMA1-286ENST00000640626 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
KCNMA1-286ENST00000640626 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
KCNMA1-286ENST00000640626 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
KCNMA1-286ENST00000640626 ERCC6Q03468 1493 aa13.59□□□□□ -0.23
KCNMA1-286ENST00000640626 MAGI1Q96QZ7 1491 aaPredicted RBP13.58□□□□□ -0.23
KCNMA1-286ENST00000640626 CTTNBP2Q8WZ74 1663 aa13.54□□□□□ -0.24
KCNMA1-286ENST00000640626 SHROOM2Q13796 1616 aa13.52□□□□□ -0.24
KCNMA1-286ENST00000640626 PRXQ9BXM0 1461 aa13.52□□□□□ -0.25
KCNMA1-286ENST00000640626 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
KCNMA1-286ENST00000640626 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
KCNMA1-286ENST00000640626 SOGA1O94964 1423 aa13.49□□□□□ -0.25
KCNMA1-286ENST00000640626 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
KCNMA1-286ENST00000640626 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
KCNMA1-286ENST00000640626 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
KCNMA1-286ENST00000640626 CHD1O14646 1710 aa13.42□□□□□ -0.26
KCNMA1-286ENST00000640626 FHAD1B1AJZ9 1412 aa13.42□□□□□ -0.26
KCNMA1-286ENST00000640626 SYNJ2O15056 1496 aa13.41□□□□□ -0.26
KCNMA1-286ENST00000640626 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
KCNMA1-286ENST00000640626 HRCP23327 699 aa13.41□□□□□ -0.26
KCNMA1-286ENST00000640626 NUP160Q12769 1436 aa13.4□□□□□ -0.26
KCNMA1-286ENST00000640626 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
KCNMA1-286ENST00000640626 RAD54L2Q9Y4B4 1467 aa13.39□□□□□ -0.27
KCNMA1-286ENST00000640626 IGF1RP08069 1367 aa13.36□□□□□ -0.27
KCNMA1-286ENST00000640626 UGGT2Q9NYU1 1516 aa13.36□□□□□ -0.27
KCNMA1-286ENST00000640626 EFCAB5A4FU69 1503 aa13.35□□□□□ -0.27
KCNMA1-286ENST00000640626 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-286ENST00000640626 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
KCNMA1-286ENST00000640626 GRIN2AQ12879 1464 aa13.33□□□□□ -0.28
KCNMA1-286ENST00000640626 CEP170Q5SW79 1584 aa13.31□□□□□ -0.28
KCNMA1-286ENST00000640626 SNAPC4Q5SXM2 1469 aa13.29□□□□□ -0.28
KCNMA1-286ENST00000640626 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
KCNMA1-286ENST00000640626 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
KCNMA1-286ENST00000640626 IQGAP2Q13576 1575 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms