RNA–Protein interactions for RNA: ENST00000640613.1

PAX6-274, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-274ENST00000640613 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
PAX6-274ENST00000640613 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
PAX6-274ENST00000640613 CHIC1Q5VXU3 224 aa20.13■□□□□ 0.81
PAX6-274ENST00000640613 SENP3Q9H4L4 574 aaPredicted RBP18.47■□□□□ 0.55
PAX6-274ENST00000640613 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
PAX6-274ENST00000640613 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
PAX6-274ENST00000640613 ZCCHC6Q5VYS8 1495 aaKnown RBP17.81■□□□□ 0.44
PAX6-274ENST00000640613 DCAF1Q9Y4B6 1507 aa17.54■□□□□ 0.4
PAX6-274ENST00000640613 ABCC9O60706 1549 aa17.52■□□□□ 0.39
PAX6-274ENST00000640613 DCAF8L2P0C7V8 631 aa17.46■□□□□ 0.39
PAX6-274ENST00000640613 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
PAX6-274ENST00000640613 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
PAX6-274ENST00000640613 FOXD1Q16676 465 aa17.26■□□□□ 0.35
PAX6-274ENST00000640613 NACADO15069 1562 aa17.16■□□□□ 0.34
PAX6-274ENST00000640613 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
PAX6-274ENST00000640613 SCRIBQ14160 1630 aa16.94■□□□□ 0.3
PAX6-274ENST00000640613 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
PAX6-274ENST00000640613 SUPT5HO00267 1087 aaKnown RBP16.7■□□□□ 0.26
PAX6-274ENST00000640613 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
PAX6-274ENST00000640613 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
PAX6-274ENST00000640613 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
PAX6-274ENST00000640613 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
PAX6-274ENST00000640613 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
PAX6-274ENST00000640613 MSH5O43196 834 aa16.37■□□□□ 0.21
PAX6-274ENST00000640613 BAZ1AQ9NRL2 1556 aaPredicted RBP16.36■□□□□ 0.21
PAX6-274ENST00000640613 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
PAX6-274ENST00000640613 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
PAX6-274ENST00000640613 WIZO95785 1651 aa16.21■□□□□ 0.19
PAX6-274ENST00000640613 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.16
PAX6-274ENST00000640613 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
PAX6-274ENST00000640613 EIF4G1Q04637 1599 aaKnown RBP16.04■□□□□ 0.16
PAX6-274ENST00000640613 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
PAX6-274ENST00000640613 SMARCA2P51531 1590 aa15.99■□□□□ 0.15
PAX6-274ENST00000640613 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
PAX6-274ENST00000640613 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
PAX6-274ENST00000640613 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
PAX6-274ENST00000640613 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
PAX6-274ENST00000640613 NCAPD3P42695 1498 aa15.84■□□□□ 0.13
PAX6-274ENST00000640613 HMGXB3Q12766 1538 aa15.83■□□□□ 0.12
PAX6-274ENST00000640613 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
PAX6-274ENST00000640613 PLPPR3Q6T4P5 718 aa15.72■□□□□ 0.11
PAX6-274ENST00000640613 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
PAX6-274ENST00000640613 ADRA2BP18089 450 aa15.65■□□□□ 0.1
PAX6-274ENST00000640613 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
PAX6-274ENST00000640613 ABCC8Q09428 1581 aa15.57■□□□□ 0.08
PAX6-274ENST00000640613 CFTRP13569 1480 aa15.5■□□□□ 0.07
PAX6-274ENST00000640613 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
PAX6-274ENST00000640613 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
PAX6-274ENST00000640613 PRDM2Q13029 1718 aa15.41■□□□□ 0.06
PAX6-274ENST00000640613 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
PAX6-274ENST00000640613 FAM9AQ8IZU1 332 aaPredicted RBP15.4■□□□□ 0.06
PAX6-274ENST00000640613 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
PAX6-274ENST00000640613 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
PAX6-274ENST00000640613 EEA1Q15075 1411 aa15.35■□□□□ 0.05
PAX6-274ENST00000640613 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
PAX6-274ENST00000640613 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
PAX6-274ENST00000640613 SOGA1O94964 1423 aa15.31■□□□□ 0.04
PAX6-274ENST00000640613 CUX1P39880 1505 aa15.29■□□□□ 0.04
PAX6-274ENST00000640613 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
PAX6-274ENST00000640613 NESP48681 1621 aa15.26■□□□□ 0.03
PAX6-274ENST00000640613 CSRNP3Q8WYN3 585 aa15.23■□□□□ 0.03
PAX6-274ENST00000640613 RUSC2Q8N2Y8 1516 aa15.23■□□□□ 0.03
PAX6-274ENST00000640613 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
PAX6-274ENST00000640613 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
PAX6-274ENST00000640613 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
PAX6-274ENST00000640613 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
PAX6-274ENST00000640613 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
PAX6-274ENST00000640613 GOLGA3Q08378 1498 aa15.13■□□□□ 0.01
PAX6-274ENST00000640613 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
PAX6-274ENST00000640613 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
PAX6-274ENST00000640613 KIF21BO75037 1637 aa15.11■□□□□ 0.01
PAX6-274ENST00000640613 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
PAX6-274ENST00000640613 TOPBP1Q92547 1522 aa15.11■□□□□ 0.01
PAX6-274ENST00000640613 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
PAX6-274ENST00000640613 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
PAX6-274ENST00000640613 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
PAX6-274ENST00000640613 CUX2O14529 1486 aa15.04■□□□□ -0
PAX6-274ENST00000640613 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
PAX6-274ENST00000640613 MRC2Q9UBG0 1479 aa15.02■□□□□ -0
PAX6-274ENST00000640613 PRXQ9BXM0 1461 aa15.02□□□□□ -0.01
PAX6-274ENST00000640613 ERICH3Q5RHP9 1530 aa15.01□□□□□ -0.01
PAX6-274ENST00000640613 ABCA10Q8WWZ4 1543 aa15□□□□□ -0.01
PAX6-274ENST00000640613 CEP162Q5TB80 1403 aa15□□□□□ -0.01
PAX6-274ENST00000640613 RAPGEF2Q9Y4G8 1499 aa15□□□□□ -0.01
PAX6-274ENST00000640613 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
PAX6-274ENST00000640613 RAD54L2Q9Y4B4 1467 aa14.97□□□□□ -0.01
PAX6-274ENST00000640613 WDR62O43379 1518 aa14.96□□□□□ -0.01
PAX6-274ENST00000640613 IGF1RP08069 1367 aa14.95□□□□□ -0.02
PAX6-274ENST00000640613 WDR97A6NE52 1622 aa14.92□□□□□ -0.02
PAX6-274ENST00000640613 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
PAX6-274ENST00000640613 CLIP1P30622 1438 aa14.87□□□□□ -0.03
PAX6-274ENST00000640613 TARBP1Q13395 1621 aaKnown RBP14.85□□□□□ -0.03
PAX6-274ENST00000640613 ABCA5Q8WWZ7 1642 aa14.85□□□□□ -0.03
PAX6-274ENST00000640613 CUL7Q14999 1698 aa14.84□□□□□ -0.03
PAX6-274ENST00000640613 GAPVD1Q14C86 1478 aa14.83□□□□□ -0.04
PAX6-274ENST00000640613 TDRD9Q8NDG6 1382 aaKnown RBP14.82□□□□□ -0.04
PAX6-274ENST00000640613 IFT140Q96RY7 1462 aa14.82□□□□□ -0.04
PAX6-274ENST00000640613 TRIM26Q12899 539 aaPredicted RBP14.8□□□□□ -0.04
PAX6-274ENST00000640613 PCGF6Q9BYE7 350 aa14.78□□□□□ -0.04
PAX6-274ENST00000640613 VPS8Q8N3P4 1428 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms