RNA–Protein interactions for RNA: ENST00000640583.1

MED17-228, Transcript of mediator complex subunit 17, humanhuman

TSL 5

Gene MED17, Length 2,835 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-228ENST00000640583 NISCHQ9Y2I1 1504 aa35.42■■■■□ 3.26
MED17-228ENST00000640583 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
MED17-228ENST00000640583 HRCP23327 699 aa30.84■■■□□ 2.53
MED17-228ENST00000640583 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
MED17-228ENST00000640583 SUPT5HO00267 1087 aaKnown RBP30.77■■■□□ 2.52
MED17-228ENST00000640583 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
MED17-228ENST00000640583 PCGF6Q9BYE7 350 aa30.28■■■□□ 2.44
MED17-228ENST00000640583 CHIC1Q5VXU3 224 aa30.26■■■□□ 2.43
MED17-228ENST00000640583 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
MED17-228ENST00000640583 ZCCHC6Q5VYS8 1495 aaKnown RBP29.98■■■□□ 2.39
MED17-228ENST00000640583 DCAF1Q9Y4B6 1507 aa29.75■■■□□ 2.35
MED17-228ENST00000640583 PELP1Q8IZL8 1130 aaKnown RBP29.51■■■□□ 2.31
MED17-228ENST00000640583 TRIM26Q12899 539 aaPredicted RBP29.47■■■□□ 2.31
MED17-228ENST00000640583 LOC105371045A0A1W2PR82 267 aa29.46■■■□□ 2.31
MED17-228ENST00000640583 DCAF8L2P0C7V8 631 aa29.31■■■□□ 2.28
MED17-228ENST00000640583 ZEB1P37275 1124 aaPredicted RBP29.24■■■□□ 2.27
MED17-228ENST00000640583 SCAF1Q9H7N4 1312 aaKnown RBP28.97■■■□□ 2.23
MED17-228ENST00000640583 ABCC9O60706 1549 aa28.92■■■□□ 2.22
MED17-228ENST00000640583 NACADO15069 1562 aa28.65■■■□□ 2.18
MED17-228ENST00000640583 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
MED17-228ENST00000640583 ACIN1Q9UKV3 1341 aaKnown RBP28.42■■■□□ 2.14
MED17-228ENST00000640583 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
MED17-228ENST00000640583 RB1CC1Q8TDY2 1594 aa28.34■■■□□ 2.13
MED17-228ENST00000640583 SCRIBQ14160 1630 aa28.34■■■□□ 2.13
MED17-228ENST00000640583 MYT1Q01538 1121 aa28.34■■■□□ 2.13
MED17-228ENST00000640583 RSF1Q96T23 1441 aaPredicted RBP28.31■■■□□ 2.12
MED17-228ENST00000640583 NEUROD1Q13562 356 aa28.28■■■□□ 2.12
MED17-228ENST00000640583 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.11
MED17-228ENST00000640583 CENPBP07199 599 aaPredicted RBP28.16■■■□□ 2.1
MED17-228ENST00000640583 CCER1Q8TC90 406 aaPredicted RBP28.15■■■□□ 2.1
MED17-228ENST00000640583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.14■■■□□ 2.09
MED17-228ENST00000640583 GTF3C3Q9Y5Q9 886 aa28.13■■■□□ 2.09
MED17-228ENST00000640583 DIEXFQ68CQ4 756 aaKnown RBP28.07■■■□□ 2.08
MED17-228ENST00000640583 UNC13AQ9UPW8 1703 aa27.88■■■□□ 2.05
MED17-228ENST00000640583 ZNF316A6NFI3 1004 aaPredicted RBP27.62■■■□□ 2.01
MED17-228ENST00000640583 BICRAQ9NZM4 1560 aa27.55■■■□□ 2
MED17-228ENST00000640583 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
MED17-228ENST00000640583 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
MED17-228ENST00000640583 TTBK1Q5TCY1 1321 aaPredicted RBP27.52■■■□□ 2
MED17-228ENST00000640583 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
MED17-228ENST00000640583 YTHDC1Q96MU7 727 aaKnown RBP27.49■■□□□ 1.99
MED17-228ENST00000640583 CEP162Q5TB80 1403 aa27.37■■□□□ 1.97
MED17-228ENST00000640583 WIZO95785 1651 aa27.37■■□□□ 1.97
MED17-228ENST00000640583 MIER1Q8N108 512 aa27.34■■□□□ 1.97
MED17-228ENST00000640583 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
MED17-228ENST00000640583 EIF4G1Q04637 1599 aaKnown RBP27.29■■□□□ 1.96
MED17-228ENST00000640583 PABPN1Q86U42 306 aaKnown RBP eCLIP27.28■■□□□ 1.96
MED17-228ENST00000640583 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
MED17-228ENST00000640583 SMARCA4P51532 1647 aa27.21■■□□□ 1.95
MED17-228ENST00000640583 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
MED17-228ENST00000640583 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
MED17-228ENST00000640583 UBTFP17480 764 aaKnown RBP27.12■■□□□ 1.93
MED17-228ENST00000640583 SOGA1O94964 1423 aa27.09■■□□□ 1.93
MED17-228ENST00000640583 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
MED17-228ENST00000640583 EEA1Q15075 1411 aa27.06■■□□□ 1.92
MED17-228ENST00000640583 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
MED17-228ENST00000640583 CLSPNQ9HAW4 1339 aa26.98■■□□□ 1.91
MED17-228ENST00000640583 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
MED17-228ENST00000640583 TOP2AP11388 1531 aaKnown RBP26.93■■□□□ 1.9
MED17-228ENST00000640583 PEG3Q9GZU2 1588 aa26.9■■□□□ 1.9
MED17-228ENST00000640583 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.9
MED17-228ENST00000640583 SUPT16HQ9Y5B9 1047 aaKnown RBP26.85■■□□□ 1.89
MED17-228ENST00000640583 SMARCA2P51531 1590 aa26.81■■□□□ 1.88
MED17-228ENST00000640583 APLP2Q06481 763 aa26.74■■□□□ 1.87
MED17-228ENST00000640583 CLIP1P30622 1438 aa26.7■■□□□ 1.86
MED17-228ENST00000640583 ATAD2BQ9ULI0 1458 aa26.69■■□□□ 1.86
MED17-228ENST00000640583 CEP164Q9UPV0 1460 aa26.68■■□□□ 1.86
MED17-228ENST00000640583 TSHZ2Q9NRE2 1034 aa26.67■■□□□ 1.86
MED17-228ENST00000640583 VPS8Q8N3P4 1428 aa26.66■■□□□ 1.86
MED17-228ENST00000640583 ANP32EQ9BTT0 268 aa26.65■■□□□ 1.86
MED17-228ENST00000640583 KIF21BO75037 1637 aa26.58■■□□□ 1.85
MED17-228ENST00000640583 DHX57Q6P158 1386 aaKnown RBP26.53■■□□□ 1.84
MED17-228ENST00000640583 BAZ1BQ9UIG0 1483 aaKnown RBP26.53■■□□□ 1.84
MED17-228ENST00000640583 NCAPD3P42695 1498 aa26.44■■□□□ 1.82
MED17-228ENST00000640583 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
MED17-228ENST00000640583 RANGAP1P46060 587 aaPredicted RBP26.4■■□□□ 1.82
MED17-228ENST00000640583 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
MED17-228ENST00000640583 SYNJ1O43426 1573 aa26.35■■□□□ 1.81
MED17-228ENST00000640583 BCL11AQ9H165 835 aa26.35■■□□□ 1.81
MED17-228ENST00000640583 BCANQ96GW7 911 aa26.25■■□□□ 1.79
MED17-228ENST00000640583 KCNH8Q96L42 1107 aa26.24■■□□□ 1.79
MED17-228ENST00000640583 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
MED17-228ENST00000640583 FKBP8Q14318 412 aa26.21■■□□□ 1.79
MED17-228ENST00000640583 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
MED17-228ENST00000640583 RRBP1Q9P2E9 1410 aaKnown RBP26.16■■□□□ 1.78
MED17-228ENST00000640583 CUX2O14529 1486 aa26.13■■□□□ 1.77
MED17-228ENST00000640583 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
MED17-228ENST00000640583 NEFLP07196 543 aa26.09■■□□□ 1.77
MED17-228ENST00000640583 RBM19Q9Y4C8 960 aaKnown RBP26.08■■□□□ 1.77
MED17-228ENST00000640583 CCNB3Q8WWL7 1395 aa26.05■■□□□ 1.76
MED17-228ENST00000640583 DDX10Q13206 875 aaKnown RBP26.01■■□□□ 1.75
MED17-228ENST00000640583 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
MED17-228ENST00000640583 ITGAEP38570 1179 aa26.01■■□□□ 1.75
MED17-228ENST00000640583 PRXQ9BXM0 1461 aa25.97■■□□□ 1.75
MED17-228ENST00000640583 RAB3GAP2Q9H2M9 1393 aa25.94■■□□□ 1.74
MED17-228ENST00000640583 TOP2BQ02880 1626 aa25.94■■□□□ 1.74
MED17-228ENST00000640583 MAPKBP1O60336 1514 aa25.91■■□□□ 1.74
MED17-228ENST00000640583 CFTRP13569 1480 aa25.9■■□□□ 1.74
MED17-228ENST00000640583 PPP1R15AO75807 674 aaPredicted RBP25.88■■□□□ 1.73
MED17-228ENST00000640583 CCER2I3L3R5 266 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms