RNA–Protein interactions for RNA: ENST00000639963.1

FAM238C-202, Transcript of family with sequence similarity 238 member C, humanhuman

TSL 2 BASIC

Gene FAM238C, Length 1,787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-202ENST00000639963 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.191e-323■■■■■ 232.4
FAM238C-202ENST00000639963 NSUN2Q08J23 767 aaKnown RBP eCLIP13.2□□□□□ -0.32e-142■■■■■ 141.9
FAM238C-202ENST00000639963 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.5□□□□□ -0.251e-67■■■■□ 20.7
FAM238C-202ENST00000639963 YWHAGP61981 247 aaKnown RBP eCLIP13.62□□□□□ -0.238e-48■■■■■ 33.3
FAM238C-202ENST00000639963 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.57□□□□□ -0.44e-35■■■■■ 54.7
FAM238C-202ENST00000639963 PABPC4Q13310 644 aaKnown RBP eCLIP15.44■□□□□ 0.069e-33■■■■■ 105.6
FAM238C-202ENST00000639963 SMNDC1O75940 238 aaKnown RBP eCLIP12.09□□□□□ -0.476e-30■■■■■ 55.8
FAM238C-202ENST00000639963 GPKOWQ92917 476 aaPredicted RBP eCLIP14.89□□□□□ -0.032e-22■■■□□ 15.9
FAM238C-202ENST00000639963 SF3A3Q12874 501 aaKnown RBP eCLIP11.74□□□□□ -0.536e-22■■■■■ 46.9
FAM238C-202ENST00000639963 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.089e-20■■■■□ 20
FAM238C-202ENST00000639963 RPS11P62280 158 aaKnown RBP eCLIP10.77□□□□□ -0.683e-19■■■■■ 52.8
FAM238C-202ENST00000639963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.59■□□□□ 0.094e-19■■■■■ 90.5
FAM238C-202ENST00000639963 WDR43Q15061 677 aaKnown RBP eCLIP17.2■□□□□ 0.349e-16■■■□□ 18.7
FAM238C-202ENST00000639963 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.291e-15■■■■■ 95.8
FAM238C-202ENST00000639963 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.052e-14■■■■■ 37.5
FAM238C-202ENST00000639963 TROVE2P10155 538 aaKnown RBP eCLIP11.89□□□□□ -0.514e-14■■□□□ 13.1
FAM238C-202ENST00000639963 FMR1Q06787 632 aaKnown RBP eCLIP15.76■□□□□ 0.111e-12■■■■■ 49.3
FAM238C-202ENST00000639963 RBM22Q9NW64 420 aaKnown RBP eCLIP13.1□□□□□ -0.311e-12■■■□□ 15.1
FAM238C-202ENST00000639963 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.595e-12■■■□□ 18.9
FAM238C-202ENST00000639963 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.171e-10■■■□□ 15.1
FAM238C-202ENST00000639963 NCBP2P52298 156 aaKnown RBP eCLIP12□□□□□ -0.492e-10■■■■■ 48.2
FAM238C-202ENST00000639963 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.1□□□□□ -0.473e-10■■■■■ 67
FAM238C-202ENST00000639963 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.152e-9■■■■□ 21
FAM238C-202ENST00000639963 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.57e-9■■■□□ 14.9
FAM238C-202ENST00000639963 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.261e-7■■■■■ 82.6
FAM238C-202ENST00000639963 SLBPQ14493 270 aaKnown RBP eCLIP12.33□□□□□ -0.442e-7■■■■■ 36.7
FAM238C-202ENST00000639963 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.196e-7■□□□□ 8.6
FAM238C-202ENST00000639963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.211e-6■■■□□ 15.4
FAM238C-202ENST00000639963 SND1Q7KZF4 910 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■□□ 16.3
FAM238C-202ENST00000639963 AARSP49588 968 aaKnown RBP eCLIP14.04□□□□□ -0.168e-6■■■■■ 52.4
FAM238C-202ENST00000639963 NPM1P06748 294 aaKnown RBP eCLIP21.22■□□□□ 0.999e-6■□□□□ 9
Retrieved 31 of 31 RNA–protein pairs in 7.1 ms