RNA–Protein interactions for RNA: ENST00000639963.1

FAM238C-202, Transcript of family with sequence similarity 238 member C, humanhuman

TSL 2 BASIC

Gene FAM238C, Length 1,787 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238C-202ENST00000639963 NISCHQ9Y2I1 1504 aa31.28■■■□□ 2.6
FAM238C-202ENST00000639963 CCDC180Q9P1Z9 1646 aa27.74■■■□□ 2.03
FAM238C-202ENST00000639963 ABCC9O60706 1549 aa27.01■■□□□ 1.91
FAM238C-202ENST00000639963 NACADO15069 1562 aa26.13■■□□□ 1.77
FAM238C-202ENST00000639963 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
FAM238C-202ENST00000639963 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
FAM238C-202ENST00000639963 ZCCHC6Q5VYS8 1495 aaKnown RBP26.07■■□□□ 1.76
FAM238C-202ENST00000639963 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
FAM238C-202ENST00000639963 DCAF1Q9Y4B6 1507 aa25.97■■□□□ 1.75
FAM238C-202ENST00000639963 UNC13AQ9UPW8 1703 aa25.31■■□□□ 1.64
FAM238C-202ENST00000639963 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
FAM238C-202ENST00000639963 BICRAQ9NZM4 1560 aa25.24■■□□□ 1.63
FAM238C-202ENST00000639963 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
FAM238C-202ENST00000639963 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
FAM238C-202ENST00000639963 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
FAM238C-202ENST00000639963 EIF4G1Q04637 1599 aaKnown RBP24.6■■□□□ 1.53
FAM238C-202ENST00000639963 CC2D2AQ9P2K1 1620 aa24.44■■□□□ 1.5
FAM238C-202ENST00000639963 CECR2Q9BXF3 1484 aa24.32■■□□□ 1.48
FAM238C-202ENST00000639963 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
FAM238C-202ENST00000639963 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
FAM238C-202ENST00000639963 NCAPD3P42695 1498 aa24.14■■□□□ 1.46
FAM238C-202ENST00000639963 ATAD2BQ9ULI0 1458 aa24.11■■□□□ 1.45
FAM238C-202ENST00000639963 SMARCA2P51531 1590 aa24.1■■□□□ 1.45
FAM238C-202ENST00000639963 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
FAM238C-202ENST00000639963 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
FAM238C-202ENST00000639963 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
FAM238C-202ENST00000639963 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
FAM238C-202ENST00000639963 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
FAM238C-202ENST00000639963 WIZO95785 1651 aa23.72■■□□□ 1.39
FAM238C-202ENST00000639963 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.37
FAM238C-202ENST00000639963 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
FAM238C-202ENST00000639963 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
FAM238C-202ENST00000639963 NESP48681 1621 aa23.37■■□□□ 1.33
FAM238C-202ENST00000639963 PDS5BQ9NTI5 1447 aa23.34■■□□□ 1.33
FAM238C-202ENST00000639963 ERCC6Q03468 1493 aa23.33■■□□□ 1.32
FAM238C-202ENST00000639963 CCDC88BA6NC98 1476 aa23.3■■□□□ 1.32
FAM238C-202ENST00000639963 CFTRP13569 1480 aa23.3■■□□□ 1.32
FAM238C-202ENST00000639963 SUPT5HO00267 1087 aaKnown RBP23.25■■□□□ 1.31
FAM238C-202ENST00000639963 CUX2O14529 1486 aa23.13■■□□□ 1.29
FAM238C-202ENST00000639963 FANCD2Q9BXW9 1451 aa23.1■■□□□ 1.29
FAM238C-202ENST00000639963 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
FAM238C-202ENST00000639963 KIF21AQ7Z4S6 1674 aa23.04■■□□□ 1.28
FAM238C-202ENST00000639963 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.28
FAM238C-202ENST00000639963 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.27
FAM238C-202ENST00000639963 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
FAM238C-202ENST00000639963 WDR62O43379 1518 aa22.94■■□□□ 1.26
FAM238C-202ENST00000639963 ABCC8Q09428 1581 aa22.85■■□□□ 1.25
FAM238C-202ENST00000639963 URB2Q14146 1524 aaKnown RBP22.83■■□□□ 1.24
FAM238C-202ENST00000639963 TOPBP1Q92547 1522 aa22.73■■□□□ 1.23
FAM238C-202ENST00000639963 DNMBPQ6XZF7 1577 aa22.71■■□□□ 1.23
FAM238C-202ENST00000639963 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
FAM238C-202ENST00000639963 CUX1P39880 1505 aa22.56■■□□□ 1.2
FAM238C-202ENST00000639963 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
FAM238C-202ENST00000639963 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.191e-323■■■■■ 232.4
FAM238C-202ENST00000639963 SOGA1O94964 1423 aa22.49■■□□□ 1.19
FAM238C-202ENST00000639963 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
FAM238C-202ENST00000639963 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
FAM238C-202ENST00000639963 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
FAM238C-202ENST00000639963 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
FAM238C-202ENST00000639963 RAD54L2Q9Y4B4 1467 aa22.4■■□□□ 1.18
FAM238C-202ENST00000639963 WDR97A6NE52 1622 aa22.39■■□□□ 1.18
FAM238C-202ENST00000639963 BIVM-ERCC5R4GMW8 1640 aa22.37■■□□□ 1.17
FAM238C-202ENST00000639963 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
FAM238C-202ENST00000639963 ABCA10Q8WWZ4 1543 aa22.33■■□□□ 1.16
FAM238C-202ENST00000639963 AQRO60306 1485 aaKnown RBP eCLIP22.32■■□□□ 1.16
FAM238C-202ENST00000639963 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
FAM238C-202ENST00000639963 TDRD9Q8NDG6 1382 aaKnown RBP22.31■■□□□ 1.16
FAM238C-202ENST00000639963 EIF4G3O43432 1585 aaKnown RBP22.31■■□□□ 1.16
FAM238C-202ENST00000639963 GRIN2BQ13224 1484 aa22.23■■□□□ 1.15
FAM238C-202ENST00000639963 GAPVD1Q14C86 1478 aa22.22■■□□□ 1.15
FAM238C-202ENST00000639963 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
FAM238C-202ENST00000639963 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
FAM238C-202ENST00000639963 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
FAM238C-202ENST00000639963 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
FAM238C-202ENST00000639963 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.12
FAM238C-202ENST00000639963 SYNJ2O15056 1496 aa22.07■■□□□ 1.12
FAM238C-202ENST00000639963 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
FAM238C-202ENST00000639963 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
FAM238C-202ENST00000639963 FBLN2P98095 1184 aa22.04■■□□□ 1.12
FAM238C-202ENST00000639963 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
FAM238C-202ENST00000639963 PBRM1Q86U86 1689 aa22.03■■□□□ 1.12
FAM238C-202ENST00000639963 FHAD1B1AJZ9 1412 aa22.01■■□□□ 1.11
FAM238C-202ENST00000639963 IGF1RP08069 1367 aa21.96■■□□□ 1.11
FAM238C-202ENST00000639963 CHD1O14646 1710 aa21.94■■□□□ 1.1
FAM238C-202ENST00000639963 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
FAM238C-202ENST00000639963 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
FAM238C-202ENST00000639963 NUP160Q12769 1436 aa21.85■■□□□ 1.09
FAM238C-202ENST00000639963 CUL7Q14999 1698 aa21.84■■□□□ 1.09
FAM238C-202ENST00000639963 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
FAM238C-202ENST00000639963 CLASP1Q7Z460 1538 aa21.82■■□□□ 1.08
FAM238C-202ENST00000639963 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
FAM238C-202ENST00000639963 EEA1Q15075 1411 aa21.76■■□□□ 1.07
FAM238C-202ENST00000639963 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
FAM238C-202ENST00000639963 RUSC2Q8N2Y8 1516 aa21.74■■□□□ 1.07
FAM238C-202ENST00000639963 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
FAM238C-202ENST00000639963 RAPGEF2Q9Y4G8 1499 aa21.7■■□□□ 1.06
FAM238C-202ENST00000639963 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
FAM238C-202ENST00000639963 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
FAM238C-202ENST00000639963 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
FAM238C-202ENST00000639963 KIAA0586Q9BVV6 1533 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms