RNA–Protein interactions for RNA: ENST00000639949.1

PFKFB3-218, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 4

Gene PFKFB3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-218ENST00000639949 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
PFKFB3-218ENST00000639949 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
PFKFB3-218ENST00000639949 ABCC9O60706 1549 aa18.59■□□□□ 0.57
PFKFB3-218ENST00000639949 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
PFKFB3-218ENST00000639949 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
PFKFB3-218ENST00000639949 NACADO15069 1562 aa17.97■□□□□ 0.47
PFKFB3-218ENST00000639949 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
PFKFB3-218ENST00000639949 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
PFKFB3-218ENST00000639949 DCAF1Q9Y4B6 1507 aa17.9■□□□□ 0.46
PFKFB3-218ENST00000639949 SCRIBQ14160 1630 aa17.47■□□□□ 0.39
PFKFB3-218ENST00000639949 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
PFKFB3-218ENST00000639949 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
PFKFB3-218ENST00000639949 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
PFKFB3-218ENST00000639949 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
PFKFB3-218ENST00000639949 EIF4G1Q04637 1599 aaKnown RBP16.91■□□□□ 0.3
PFKFB3-218ENST00000639949 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
PFKFB3-218ENST00000639949 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
PFKFB3-218ENST00000639949 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
PFKFB3-218ENST00000639949 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
PFKFB3-218ENST00000639949 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
PFKFB3-218ENST00000639949 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
PFKFB3-218ENST00000639949 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
PFKFB3-218ENST00000639949 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
PFKFB3-218ENST00000639949 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
PFKFB3-218ENST00000639949 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
PFKFB3-218ENST00000639949 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
PFKFB3-218ENST00000639949 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
PFKFB3-218ENST00000639949 BAZ1BQ9UIG0 1483 aaKnown RBP16.49■□□□□ 0.23
PFKFB3-218ENST00000639949 WIZO95785 1651 aa16.45■□□□□ 0.22
PFKFB3-218ENST00000639949 TOP2AP11388 1531 aaKnown RBP16.33■□□□□ 0.2
PFKFB3-218ENST00000639949 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
PFKFB3-218ENST00000639949 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
PFKFB3-218ENST00000639949 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
PFKFB3-218ENST00000639949 LAMC3Q9Y6N6 1575 aa16.11■□□□□ 0.17
PFKFB3-218ENST00000639949 NESP48681 1621 aa16.11■□□□□ 0.17
PFKFB3-218ENST00000639949 CFTRP13569 1480 aa16.05■□□□□ 0.16
PFKFB3-218ENST00000639949 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
PFKFB3-218ENST00000639949 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
PFKFB3-218ENST00000639949 FANCD2Q9BXW9 1451 aa15.93■□□□□ 0.14
PFKFB3-218ENST00000639949 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
PFKFB3-218ENST00000639949 KIF21AQ7Z4S6 1674 aa15.87■□□□□ 0.13
PFKFB3-218ENST00000639949 MRC2Q9UBG0 1479 aa15.84■□□□□ 0.13
PFKFB3-218ENST00000639949 PRDM2Q13029 1718 aa15.83■□□□□ 0.13
PFKFB3-218ENST00000639949 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
PFKFB3-218ENST00000639949 CUX2O14529 1486 aa15.79■□□□□ 0.12
PFKFB3-218ENST00000639949 WDR62O43379 1518 aa15.77■□□□□ 0.11
PFKFB3-218ENST00000639949 URB2Q14146 1524 aaKnown RBP15.74■□□□□ 0.11
PFKFB3-218ENST00000639949 ABCC8Q09428 1581 aa15.71■□□□□ 0.11
PFKFB3-218ENST00000639949 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
PFKFB3-218ENST00000639949 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
PFKFB3-218ENST00000639949 CUX1P39880 1505 aa15.62■□□□□ 0.09
PFKFB3-218ENST00000639949 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.095e-6■■■■□ 23
PFKFB3-218ENST00000639949 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
PFKFB3-218ENST00000639949 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
PFKFB3-218ENST00000639949 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
PFKFB3-218ENST00000639949 SOGA1O94964 1423 aa15.52■□□□□ 0.08
PFKFB3-218ENST00000639949 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
PFKFB3-218ENST00000639949 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
PFKFB3-218ENST00000639949 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
PFKFB3-218ENST00000639949 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
PFKFB3-218ENST00000639949 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
PFKFB3-218ENST00000639949 ZNF608Q9ULD9 1512 aaPredicted RBP15.45■□□□□ 0.06
PFKFB3-218ENST00000639949 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
PFKFB3-218ENST00000639949 TDRD9Q8NDG6 1382 aaKnown RBP15.4■□□□□ 0.06
PFKFB3-218ENST00000639949 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.064e-7■■■■■ 37.8
PFKFB3-218ENST00000639949 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
PFKFB3-218ENST00000639949 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
PFKFB3-218ENST00000639949 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
PFKFB3-218ENST00000639949 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
PFKFB3-218ENST00000639949 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
PFKFB3-218ENST00000639949 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
PFKFB3-218ENST00000639949 KIF27Q86VH2 1401 aa15.27■□□□□ 0.04
PFKFB3-218ENST00000639949 SNAPC4Q5SXM2 1469 aa15.27■□□□□ 0.03
PFKFB3-218ENST00000639949 CHIC1Q5VXU3 224 aa15.26■□□□□ 0.03
PFKFB3-218ENST00000639949 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
PFKFB3-218ENST00000639949 ERICH3Q5RHP9 1530 aa15.22■□□□□ 0.03
PFKFB3-218ENST00000639949 PBRM1Q86U86 1689 aa15.22■□□□□ 0.03
PFKFB3-218ENST00000639949 FBLN2P98095 1184 aa15.2■□□□□ 0.02
PFKFB3-218ENST00000639949 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
PFKFB3-218ENST00000639949 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
PFKFB3-218ENST00000639949 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
PFKFB3-218ENST00000639949 IGF1RP08069 1367 aa15.18■□□□□ 0.02
PFKFB3-218ENST00000639949 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
PFKFB3-218ENST00000639949 ADAMTS12P58397 1594 aa15.15■□□□□ 0.02
PFKFB3-218ENST00000639949 RUSC2Q8N2Y8 1516 aa15.14■□□□□ 0.01
PFKFB3-218ENST00000639949 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
PFKFB3-218ENST00000639949 CHD1O14646 1710 aa15.12■□□□□ 0.01
PFKFB3-218ENST00000639949 GRIN2AQ12879 1464 aa15.11■□□□□ 0.01
PFKFB3-218ENST00000639949 CARMIL1Q5VZK9 1371 aa15.11■□□□□ 0.01
PFKFB3-218ENST00000639949 EEA1Q15075 1411 aa15.1■□□□□ 0.01
PFKFB3-218ENST00000639949 CUL7Q14999 1698 aa15.1■□□□□ 0.01
PFKFB3-218ENST00000639949 CSRNP3Q8WYN3 585 aa15.05■□□□□ -0
PFKFB3-218ENST00000639949 NUP160Q12769 1436 aa15.04■□□□□ -0
PFKFB3-218ENST00000639949 RAPGEF2Q9Y4G8 1499 aa15.02■□□□□ -0
PFKFB3-218ENST00000639949 FAM9AQ8IZU1 332 aaPredicted RBP15.02■□□□□ -0
PFKFB3-218ENST00000639949 CLASP1Q7Z460 1538 aa15.02□□□□□ -0.01
PFKFB3-218ENST00000639949 CEP170Q5SW79 1584 aa15.01□□□□□ -0.01
PFKFB3-218ENST00000639949 PRXQ9BXM0 1461 aa15.01□□□□□ -0.01
PFKFB3-218ENST00000639949 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
PFKFB3-218ENST00000639949 JPH4Q96JJ6 628 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms