RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
PAX6-261ENST00000639943 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
PAX6-261ENST00000639943 ZCCHC6Q5VYS8 1495 aaKnown RBP22.8■■□□□ 1.24
PAX6-261ENST00000639943 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.18
PAX6-261ENST00000639943 DCAF8L2P0C7V8 631 aa22.32■■□□□ 1.16
PAX6-261ENST00000639943 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
PAX6-261ENST00000639943 CHIC1Q5VXU3 224 aa22.08■■□□□ 1.12
PAX6-261ENST00000639943 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
PAX6-261ENST00000639943 ABCC9O60706 1549 aa21.99■■□□□ 1.11
PAX6-261ENST00000639943 NACADO15069 1562 aa21.83■■□□□ 1.09
PAX6-261ENST00000639943 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
PAX6-261ENST00000639943 RB1CC1Q8TDY2 1594 aa21.58■■□□□ 1.05
PAX6-261ENST00000639943 SUPT5HO00267 1087 aaKnown RBP21.58■■□□□ 1.04
PAX6-261ENST00000639943 AEBP2Q6ZN18 517 aaPredicted RBP21.56■■□□□ 1.04
PAX6-261ENST00000639943 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
PAX6-261ENST00000639943 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
PAX6-261ENST00000639943 CECR2Q9BXF3 1484 aa21.02■□□□□ 0.95
PAX6-261ENST00000639943 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
PAX6-261ENST00000639943 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
PAX6-261ENST00000639943 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
PAX6-261ENST00000639943 PABPN1Q86U42 306 aaKnown RBP eCLIP20.8■□□□□ 0.92
PAX6-261ENST00000639943 WIZO95785 1651 aa20.78■□□□□ 0.92
PAX6-261ENST00000639943 SMARCA4P51532 1647 aa20.77■□□□□ 0.91
PAX6-261ENST00000639943 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
PAX6-261ENST00000639943 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
PAX6-261ENST00000639943 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
PAX6-261ENST00000639943 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
PAX6-261ENST00000639943 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
PAX6-261ENST00000639943 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
PAX6-261ENST00000639943 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
PAX6-261ENST00000639943 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.83
PAX6-261ENST00000639943 NCAPD3P42695 1498 aa20.14■□□□□ 0.81
PAX6-261ENST00000639943 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
PAX6-261ENST00000639943 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
PAX6-261ENST00000639943 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
PAX6-261ENST00000639943 LOC105371045A0A1W2PR82 267 aa20■□□□□ 0.79
PAX6-261ENST00000639943 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
PAX6-261ENST00000639943 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
PAX6-261ENST00000639943 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
PAX6-261ENST00000639943 CFTRP13569 1480 aa19.77■□□□□ 0.75
PAX6-261ENST00000639943 SYNJ1O43426 1573 aa19.76■□□□□ 0.75
PAX6-261ENST00000639943 EEA1Q15075 1411 aa19.73■□□□□ 0.75
PAX6-261ENST00000639943 PRDM2Q13029 1718 aa19.71■□□□□ 0.75
PAX6-261ENST00000639943 SOGA1O94964 1423 aa19.7■□□□□ 0.74
PAX6-261ENST00000639943 TOP2BQ02880 1626 aa19.67■□□□□ 0.74
PAX6-261ENST00000639943 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
PAX6-261ENST00000639943 BIVM-ERCC5R4GMW8 1640 aa19.65■□□□□ 0.74
PAX6-261ENST00000639943 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
PAX6-261ENST00000639943 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
PAX6-261ENST00000639943 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
PAX6-261ENST00000639943 CUX1P39880 1505 aa19.55■□□□□ 0.72
PAX6-261ENST00000639943 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
PAX6-261ENST00000639943 GOLGA3Q08378 1498 aa19.47■□□□□ 0.71
PAX6-261ENST00000639943 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
PAX6-261ENST00000639943 KIF21BO75037 1637 aa19.45■□□□□ 0.7
PAX6-261ENST00000639943 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
PAX6-261ENST00000639943 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
PAX6-261ENST00000639943 LAMC3Q9Y6N6 1575 aa19.42■□□□□ 0.7
PAX6-261ENST00000639943 UBTFP17480 764 aaKnown RBP19.39■□□□□ 0.69
PAX6-261ENST00000639943 NESP48681 1621 aa19.38■□□□□ 0.69
PAX6-261ENST00000639943 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
PAX6-261ENST00000639943 CEP162Q5TB80 1403 aa19.36■□□□□ 0.69
PAX6-261ENST00000639943 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
PAX6-261ENST00000639943 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
PAX6-261ENST00000639943 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
PAX6-261ENST00000639943 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
PAX6-261ENST00000639943 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
PAX6-261ENST00000639943 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
PAX6-261ENST00000639943 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
PAX6-261ENST00000639943 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
PAX6-261ENST00000639943 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
PAX6-261ENST00000639943 CUX2O14529 1486 aa19.23■□□□□ 0.67
PAX6-261ENST00000639943 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
PAX6-261ENST00000639943 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
PAX6-261ENST00000639943 URB2Q14146 1524 aaKnown RBP19.16■□□□□ 0.66
PAX6-261ENST00000639943 CLIP1P30622 1438 aa19.16■□□□□ 0.66
PAX6-261ENST00000639943 ABCA10Q8WWZ4 1543 aa19.15■□□□□ 0.66
PAX6-261ENST00000639943 IGF1RP08069 1367 aa19.15■□□□□ 0.66
PAX6-261ENST00000639943 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
PAX6-261ENST00000639943 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
PAX6-261ENST00000639943 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
PAX6-261ENST00000639943 WDR97A6NE52 1622 aa19.05■□□□□ 0.64
PAX6-261ENST00000639943 PPARGC1BQ86YN6 1023 aaKnown RBP19.04■□□□□ 0.64
PAX6-261ENST00000639943 VPS8Q8N3P4 1428 aa19.03■□□□□ 0.64
PAX6-261ENST00000639943 HRCP23327 699 aa19.02■□□□□ 0.64
PAX6-261ENST00000639943 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
PAX6-261ENST00000639943 CUL7Q14999 1698 aa18.98■□□□□ 0.63
PAX6-261ENST00000639943 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
PAX6-261ENST00000639943 ABCA5Q8WWZ7 1642 aa18.96■□□□□ 0.63
PAX6-261ENST00000639943 TARBP1Q13395 1621 aaKnown RBP18.94■□□□□ 0.62
PAX6-261ENST00000639943 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
PAX6-261ENST00000639943 GAPVD1Q14C86 1478 aa18.92■□□□□ 0.62
PAX6-261ENST00000639943 TDRD9Q8NDG6 1382 aaKnown RBP18.91■□□□□ 0.62
PAX6-261ENST00000639943 APLP2Q06481 763 aa18.89■□□□□ 0.61
PAX6-261ENST00000639943 ARHGAP35Q9NRY4 1499 aa18.88■□□□□ 0.61
PAX6-261ENST00000639943 WDR62O43379 1518 aa18.88■□□□□ 0.61
PAX6-261ENST00000639943 ERCC6Q03468 1493 aa18.85■□□□□ 0.61
PAX6-261ENST00000639943 TTBK1Q5TCY1 1321 aaPredicted RBP18.84■□□□□ 0.61
PAX6-261ENST00000639943 CTTNBP2Q8WZ74 1663 aa18.81■□□□□ 0.6
PAX6-261ENST00000639943 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms